| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5048 |
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| Symbol | |
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| ID | 6114041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5573000 |
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| End bp | 5574418 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641624863 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001751893 |
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| Protein GI | 170724205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.11831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC TGATCCTGGC TGGCTTTTGC CTGTCTCTTG GTGCCTGCAT GATGGTAGGC
CCGGACTACG AAGTGCCCAA GGACGCGGCA GTGCAGCGCA GCGACCTCAA TGGGCCGCTG
CGCCAGGATG CCGCCAGCGT CGTGTCGGCG CCGGTACCCG AGGACTGGTG GCAGCTGTAT
CAGGATCAAC GCCTGAATGA GCTGGTGCGC CAGGCGTTGA GTGCCAACAC CGAACTGCGC
GTGGCTGCGG CCAACATTGC CAAGGCCCGT GCGCAGGTCG AGGTAGCCCA GTCCCAGGGT
GGATTCAATG GTGGCATCAA AGCCGGAGCC CAGCGGTTGC AGGAGTCTGG CGAGGCTTTT
CTGCTGACCG AGAAGGTGCC AGTGGCCAAC ATCGGCGAGG CGATCATCAG CGCTTCCTAC
CAGTTTGACC TGTGGGGTAC CTTCAAGCGC GGCACCGAAG CGGCCAAGGC CAATGCCGAC
GCTGTGCAGG CCGCTGCCGA TACCGCCCGC ATCACGTTGG TGGCCGATGT GGTCAAGGCC
TACACCCAGG TGTGTTCGGC CAACGAGGAA TACCACATCG CCCGCGAGTC GCTCGGCTTG
CAGCAGCAGA GCGTGCAGCT CAACCAGCGC CTGCGTGATG CTGGCCGGGG TGACGAAACC
CAGGTCACTC GCTCGCAGAC CCAGTTCAAA TCGCTGCGCG CAGAGTTGCC GCGCTTCAAG
GCCGAGCGGG AAACCGGCCT GTATACGTTG GCTGCGCTGC TGGCCAAGCC TGTGGGGCAA
CTGCCTGCCG GCACTGCCGA GTGTGCCGAG CTGCCACAGC TGAACCAGCT GTTGCCGGTC
GGTGATGGCG CCGCGCTGCT CAAGCGCCGC CCTGACGTGC GCCAGGCCGA ACGTCAGTTG
GCGGCGTCTA CAGCGAATAT CGGCGTGGCC ACGGGCGCCC TGTATCCCGA CATCAGCATC
GGCGCCCAGG TCGGTACCAT CGGTATTCTC GAGAACCTGG GGGATCCTGC GACCAACCGC
TGGGGCTTCG GCCCGCAGAT CAGCTGGAGC ATCCCCACTA ACGGTACCCG TGCCCGCATC
CGCATGGCTG AGGCTTCGAC CCAGGCGGCG CTGGCGCATT TCGACGGCGT GGTGCTCAAC
GCCATTCGCG AAACCCAGAC CCGCCTGGCC CAGTACAGCG CCTTGCTCGA CCGGCGTGAT
GCGCTGGCCG AGGCGGAGAA ATCGGCGAAA GAAGCGGCGG ACCAGACGCA CCGCTATTAC
CAGGCGGGGC GTGAGTCATT CCTGGCGGAC TTGCAGGCGA CGCGGACCTA CACGGACATG
CGCGCGCAGC TGGCGGCGGC CAATAGCCAG GTGGCGATGG GGCAGATCGG TGTGTTCCTG
GCGTTGGGCG GTGGTTGGAA GGATACCGCC AAGCCTTGA
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| Protein sequence | MKQLILAGFC LSLGACMMVG PDYEVPKDAA VQRSDLNGPL RQDAASVVSA PVPEDWWQLY
QDQRLNELVR QALSANTELR VAAANIAKAR AQVEVAQSQG GFNGGIKAGA QRLQESGEAF
LLTEKVPVAN IGEAIISASY QFDLWGTFKR GTEAAKANAD AVQAAADTAR ITLVADVVKA
YTQVCSANEE YHIARESLGL QQQSVQLNQR LRDAGRGDET QVTRSQTQFK SLRAELPRFK
AERETGLYTL AALLAKPVGQ LPAGTAECAE LPQLNQLLPV GDGAALLKRR PDVRQAERQL
AASTANIGVA TGALYPDISI GAQVGTIGIL ENLGDPATNR WGFGPQISWS IPTNGTRARI
RMAEASTQAA LAHFDGVVLN AIRETQTRLA QYSALLDRRD ALAEAEKSAK EAADQTHRYY
QAGRESFLAD LQATRTYTDM RAQLAAANSQ VAMGQIGVFL ALGGGWKDTA KP
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