| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5036 |
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| Symbol | |
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| ID | 6114029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5560611 |
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| End bp | 5562077 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624851 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001751881 |
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| Protein GI | 170724193 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTATC GCGACTTGCG CGACTTCATC CGTGGCCTGG AACAGCGCGG TGAACTCAAG
CGCATCCAGG TTCCGATCTC CCCTGTCCTG GAAATGACCG AGGTGTGTGA CCGCACCCTG
CGTGCAAAGG GCCCGGCGTT GTTGTTCGAA AAGCCCACGG GCTTCGACAT TCCGGTGCTC
GGCAACCTGT TCGGCACCCC GGAGCGGGTG GCCATGGGCA TGGGCGCCGA GTCGGTCGAG
GAGCTGCGCG AGATCGGCAA GCTGCTGGCT TTCCTCAAGG AGCCGGAGCC GCCGAAAGGC
CTCAAGGACG CCTGGTCGAA GCTGCCGATC TTCAAGAAGG TCGTGTCGAT GGCGCCGAAG
GTGGTCAAGG ATGCCGTTTG CCAGGAGGTG GTGGTCGAGG GTGATGATGT CGACCTTGGC
CAACTGCCGA TCCAGCACTG CTGGCCGGGC GACGTGGCGC CGCTGATCAC CTGGGGTCTT
ACCGTGACCC GCGGCCCGAA CAAGGACCGC CAGAACCTGG GCATTTATCG CCAGCAGGTC
ATCGGCCGCA ACAAGGTCAT CATGCGTTGG TTGAGCCACC GCGGTGGCGC TCTGGATTAT
CGCGAGTGGT GCGAGAAGAA CCCCGGCCAA CCGTTCCCGG TCGCCGTTGC TCTGGGCGCC
GACCCGGCAA CCATCCTCGG CGCTGTCACG CCGGTGCCAG ATACTTTGTC CGAGTATGCC
TTCGCCGGCC TGCTGCGTGG CAATCGCACC GAGTTGGTCA AATGCCGAGG CAGCAACCTG
CAGGTGCCGG CCACCGCCGA GATCATCCTT GAAGGTGTGA TCCACCCGGG GGAGATGGCT
CCGGAAGGCC CTTATGGTGA CCACACCGGC TACTACAACG AAGTGGACAG CTTCCCGGTG
TTCACCGTCG AACGCATCAC CCACCGGCAA AAACCGATCT ACCACAGCAC CTATACCGGT
CGGCCGCCAG ATGAGCCGGC CATCCTCGGC GTGGCGCTCA ATGAAGTGTT CGTGCCGATC
CTGCAAAAGC AGTTCCCGGA GATCGTCGAC TTCTACCTGC CGCCGGAAGG GTGCTCGTAC
CGCATGGCGG TGGTGACGAT GAAGAAGCAG TACCCGGGCC ACGCCAAGCG CGTGATGCTG
GGTGTGTGGT CGTTCCTGAG ACAGTTCATG TACACCAAGT TCGTTATCGT TACCGACGAC
GACATCAACG CCCGTGACTG GAATGACGTG ATCTGGGCCA TCACCACGCG CATGGACCCC
AAGCGTGATA CGGTGATGAT CGACAACACG CCGATCGATT ACCTGGACTT TGCGTCGCCG
GTATCGGGCC TGGGGTCGAA GATGGGCCTG GATGCCACCC ACAAGTGGCC GGGCGAGACT
ACACGCGAAT GGGGCCGGGT CATCGTCAAG GACGAGGCCG TCACCCGCCG CATCGATGAG
TTGTGGGACC AGTTGGGAAT AGATTGA
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| Protein sequence | MQYRDLRDFI RGLEQRGELK RIQVPISPVL EMTEVCDRTL RAKGPALLFE KPTGFDIPVL
GNLFGTPERV AMGMGAESVE ELREIGKLLA FLKEPEPPKG LKDAWSKLPI FKKVVSMAPK
VVKDAVCQEV VVEGDDVDLG QLPIQHCWPG DVAPLITWGL TVTRGPNKDR QNLGIYRQQV
IGRNKVIMRW LSHRGGALDY REWCEKNPGQ PFPVAVALGA DPATILGAVT PVPDTLSEYA
FAGLLRGNRT ELVKCRGSNL QVPATAEIIL EGVIHPGEMA PEGPYGDHTG YYNEVDSFPV
FTVERITHRQ KPIYHSTYTG RPPDEPAILG VALNEVFVPI LQKQFPEIVD FYLPPEGCSY
RMAVVTMKKQ YPGHAKRVML GVWSFLRQFM YTKFVIVTDD DINARDWNDV IWAITTRMDP
KRDTVMIDNT PIDYLDFASP VSGLGSKMGL DATHKWPGET TREWGRVIVK DEAVTRRIDE
LWDQLGID
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