| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5035 |
|---|
| Symbol | |
|---|
| ID | 6114028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5559643 |
|---|
| End bp | 5560611 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641624850 |
|---|
| Product | CDP-6-deoxy-delta-3,4-glucoseen reductase |
|---|
| Protein accession | YP_001751880 |
|---|
| Protein GI | 170724192 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTAA CGTTGCAGCC GTCCGGGGCG GTGCTGGCGC TCGAACCCGG GGAACGGATC
CTGGATGGAG CGCGGCGGCT GGGCTATGAC TGCCCGAACA GCTGTCGCAA TGGCAATTGC
CATGTGTGCG CCGCATTGTT GGTCGAAGGT CGCGTTCGCC AGAACGGTGA GGTGCGCGAC
CATGGTGAGC TGTTCACGTG CATCGCCGAA CCGCTGGAGG ATTGCGTGCT GCTCTGGGAT
GGTGTGCTGG CCCTGGGCGA GCTGCCAGTG CGCAAGCTGG CATGCAGCGT CATTGAATGC
CTGGAGGTGG GTGGCGACGT CTGGCGCGTG CGTTTGCGCG CGCCGGCTGG CAAGCCACTG
CGCTATCACG CCGGGCAGTA TCTGATGATC GAGCGCGAGG GCGGCAAGCC GGCGGCCTTC
TCGCTGGCGT CTGCCCCGCA CAGTGGGCGC GACCTTGAGC TTCACGTGTT GGTCCGTGAA
GACAGCGCCC GTCAGCTGTT GGCGCAGCTG CAGCGTGACC CTATCGCCCG CATCGAAATG
CCATTCGGTG ACACCCACCT GGCCGAGCTG CCCGATGGAC CACTGGTGCT CATCGCTGCG
GGGACCGGCA TGGGGCAGAT GCACAGCCTG GTCGAGCATT GCCGCGCCCA GGGCTTCAAG
CACCCGGTGC ACCTCTACTG GGGCGTGCGA CGCCCTGAAG ACTTCTACGC CATCGAGCAC
TGGGACGAAT GGGAGCGTCT GCCCAACCTG TTCCTGCACA AGGTGGTGAG TGACCTGTGT
GGCTGGGAAG GCCGCTGCGG CATGTTGCAC GAGGCCGTGT GCGAGGACGT GCAAGACCTC
AATACGGTTC ATGTCTATGC CAGCGGTTCA CCAAATATGG TTTATGCCAC GCTCGATGCT
TTGGTCGAGG CCGGTATGGA TGCGCATCGC ATGCGTGCGG ATGTGTTTGC CTACGCGCCG
CGTGGTTAA
|
|---|
| Protein sequence | MQVTLQPSGA VLALEPGERI LDGARRLGYD CPNSCRNGNC HVCAALLVEG RVRQNGEVRD
HGELFTCIAE PLEDCVLLWD GVLALGELPV RKLACSVIEC LEVGGDVWRV RLRAPAGKPL
RYHAGQYLMI EREGGKPAAF SLASAPHSGR DLELHVLVRE DSARQLLAQL QRDPIARIEM
PFGDTHLAEL PDGPLVLIAA GTGMGQMHSL VEHCRAQGFK HPVHLYWGVR RPEDFYAIEH
WDEWERLPNL FLHKVVSDLC GWEGRCGMLH EAVCEDVQDL NTVHVYASGS PNMVYATLDA
LVEAGMDAHR MRADVFAYAP RG
|
|---|
| |