Gene PputW619_5022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_5022 
Symbol 
ID6114014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5549934 
End bp5551157 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID641624836 
Product2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 
Protein accessionYP_001751867 
Protein GI170724179 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGC GCGCAGATCT GTTGATTGTC GGTGCCGGTA TGGTCGGCAG CGCCTTGGCC 
TTGGCATTGC GCCACAGTGG CCTGGAAATA CTCCTGCTCG ACGGTGGTTC GCTGACGGTG
AAGCCGTTTG ACGGCGATGC GCCGTTCGAG GCGCGGGTCA GCGCCCTTTC GGCGGCCAGC
CAGCGCATCC TCGAGCGTTT GGGCGCCTGG GAGGAAATTG CCAAACGGCG TGTTTCGCCC
TACTCGGACA TGCATGTCTG GGACGGTAGC GGCACTGGGC AGATTCACTT CTCCGCCGCC
AGCGTGCACG CGCAGGTGCT TGGCCATATC GTCGAAAACC GGGTGGTACA GGACGGCCTG
CTGGAGCGCC TGCATGACAG CGATATTGGC CTGCTGCCCA ACGCCCGCCT GGAGCAGATG
CGCCGCTCTG GCGATGAGTG GCTGCTGACC CTGGCCGATG GTCGCCGCCT GCGGGCACCG
CTGGTGGTGG CTGCCGACGG TGGCAACTCG GCGGTGCGGC GCCTGGCCGG CTGCCAGACC
CGTGAGTGGG ATTACCTGCA CCACGCTATC GTCACCAGCG TGCGCTGCAG CGCTGCACAC
CAGGCTACCG CCTGGCAGCG TTTCACCGAC GAAGGGCCGC TGGCCTTCCT GCCCTTGTCG
CGAGACGGCG AGCAGGGCTG GTGCTCGATA GTGTGGTCGA CCACGCCGGA ACAGGCCGAG
CAGCTCATGG CGCTGGATGA TCAAGCTTTC CTCAAGGCCT TGGAGCGTGG ATTCGAGGGG
CGACTGGGCC AAGTGCTGCA TGCCGACCCT CGGGTTTGCG TGCCGTTGCG CCAACGCCAC
GCCAAGCGGT ACGTGGACGA GGGGCTCGCA CTGATCGGCG ATGCCGCGCA CACAATCCAT
CCGCTGGCTG GGCAAGGCGT AAACCTGGGC TTTCTCGATG CCGCGGTGCT GGCTGAAGTG
CTGGTGAACG CCTGCGAGCG TGGTGAACGG CTGGCGGATG TGAAAGTGCT CAGCCGCTAT
GAGCGCCGAC GCATGCCGCA CAACCTGGCA TTGATGGCAG CTATGGAGGG CTTCGAGCGG
CTGTTCCAGG CCAACCCGCT GCCGTTGCGC TGGTTGCGTA ACAGCGGTCT GAAGCTGGTG
CAGCAGATGC CGGAGGCCAA GGCGCTGTTC GTGCGCCAGG CATTGGGGCT TTCCGGGGAC
TTGCCGGAGC TGGCCAAGCC TTGA
 
Protein sequence
MEMRADLLIV GAGMVGSALA LALRHSGLEI LLLDGGSLTV KPFDGDAPFE ARVSALSAAS 
QRILERLGAW EEIAKRRVSP YSDMHVWDGS GTGQIHFSAA SVHAQVLGHI VENRVVQDGL
LERLHDSDIG LLPNARLEQM RRSGDEWLLT LADGRRLRAP LVVAADGGNS AVRRLAGCQT
REWDYLHHAI VTSVRCSAAH QATAWQRFTD EGPLAFLPLS RDGEQGWCSI VWSTTPEQAE
QLMALDDQAF LKALERGFEG RLGQVLHADP RVCVPLRQRH AKRYVDEGLA LIGDAAHTIH
PLAGQGVNLG FLDAAVLAEV LVNACERGER LADVKVLSRY ERRRMPHNLA LMAAMEGFER
LFQANPLPLR WLRNSGLKLV QQMPEAKALF VRQALGLSGD LPELAKP