| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5015 |
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| Symbol | |
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| ID | 6114007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5540224 |
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| End bp | 5541909 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624829 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001751860 |
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| Protein GI | 170724172 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.476685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACC CCGACGATCG ATCCCTCGAC CTCAAGCGCG TGCTGGACAC GTTGCAAGCC
GACCAGCGCC TGAGCGCCAA CGACGCTAGG CAAGTACTCG AATACGCCAA CTCACAGCCA
CCTCGCCATC CGCTCGAAAC CGTAGCGGCC CTGGGCCTCG AAGACCGCCA GCACCCCGGC
CAGCGCCTGC ATCTGGACTG CCTGTGCCAA TGGCTCGCCA GAAAAGTCGG GCAGCCTTAC
CAGCGTATCG ACCCACTGCA ACTCGACCTG TCTCAGGTCA ACGGGCTGAT ATCGCCAGCA
TTCGCCCATC GCCACGGCAT ACTCATCCTG GCCAGCGACA GCCTGGGCAT CACCGTGGCC
AGTGCGCAGC CTTACCAGTG TGACTGGCAA ACCGATCTGG CCCGCAGCCT GGGCAAGCCG
ATCCGCCGCG TGCTCGCCAG CCCCCTGCAG TTGCGCCAGG TGGGCCAGTC GTTGTCTCGC
CTCGCCCACT CGGTGCAAGG CGCCCAGCAT CAGCAGTCGG CAAGCCTGGG TGAGCTGGAG
CAGTGGCTGG AGCAGGACAA GCGCCAGGGC AACGCCACGG CAGACGACGC GCATATCGTG
CACATCGTCG ACTGGCTGCT GCAGTACGCT GTCGAACAGC GCGCCAGTGA CATCCATCTT
GAGCCGCGCA GCGAGCAGGG CCGATTGCGT TATCGCATAG ACGGCCTCCT GCATACGGTC
TACGCCTTCC CGGCCAGCGT GACCCTGGCC GTCGTCAGCC GCCTGAAGCA CTTGGGCCAC
ATGGATGTCG CGGAGAAACG CCGGCCGCAG GATGGCCGCA TGAAGTGCAG CCTGCCAGGT
GGCCGCGAAG TGGAATTGCG CCTGTCTACC CTGCCCACCC CCTTTGGCGA AAAGCTGGTA
CTGCGGTTGT TCGACCCACA ACAGCTACAG GAAGACTTCG ACCGCCTGGG CCTGGAAGGT
GAACAACTGC AGCAGTGGCA GGCCCTGCTG CAGCGCCGTC ATGGCATGCT GCTGGTCACC
GGCCCTACCG GTTCAGGCAA GACCAGCACG CTTTACGCAA GCCTGAAGCG GCTGGCCACA
CCCGAGGTCA ACTTGTGCAC CATCGAAGAC CCGATCGAAC GCCTGGAGCC GGCGTTCAAT
CAATTACAGG TGCAGCCGAC ACTGGACCTC AGCTTCGCCA ACGGTGTACG CGCGCTGCTG
CGCCAAGACC CTGACATCAT CATGATCGGC GAGATCCGCG ATCGCGAGAC GGCTCTGGTA
GCCGTGCAAG CTGCCCTTAC CGGACACCTG GTGCTCTCGA CCCTGCACAC CAACGACAGC
TGTGGGGCCA TTACCCGCCT GCTGGAACTG GGCGTGCCCG ATTACCTGAT CAAGGCCTCC
CTGAGTGGGG TGATGGCACA GCGCCTGGTA CGCGTGCTGT GCCGTGAGTG CCAGGGCTGC
GCAGCATCGG CCAGCGGCCA GCCTTGCCTG ATGTGCCGGG GCACCGGCTT TGATGGTCGA
ACGGGCGTGT TCGAGCTACT GGTCCCGAGC GAAAGCCTGC GCGCCCGGAT AGGCGCCGGA
GCGGACCTTG CCAGCTTGCG GCGACAGGCA TTGAGCGAAG GGTTGCTGGA CCTGAAACGC
TGCGGGGAGG CAAAAGTGGC CCGTGGACTG ACCTGCCAAG AGGAAGTGCT GCGGGTCTGC
ACATGA
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| Protein sequence | MHNPDDRSLD LKRVLDTLQA DQRLSANDAR QVLEYANSQP PRHPLETVAA LGLEDRQHPG
QRLHLDCLCQ WLARKVGQPY QRIDPLQLDL SQVNGLISPA FAHRHGILIL ASDSLGITVA
SAQPYQCDWQ TDLARSLGKP IRRVLASPLQ LRQVGQSLSR LAHSVQGAQH QQSASLGELE
QWLEQDKRQG NATADDAHIV HIVDWLLQYA VEQRASDIHL EPRSEQGRLR YRIDGLLHTV
YAFPASVTLA VVSRLKHLGH MDVAEKRRPQ DGRMKCSLPG GREVELRLST LPTPFGEKLV
LRLFDPQQLQ EDFDRLGLEG EQLQQWQALL QRRHGMLLVT GPTGSGKTST LYASLKRLAT
PEVNLCTIED PIERLEPAFN QLQVQPTLDL SFANGVRALL RQDPDIIMIG EIRDRETALV
AVQAALTGHL VLSTLHTNDS CGAITRLLEL GVPDYLIKAS LSGVMAQRLV RVLCRECQGC
AASASGQPCL MCRGTGFDGR TGVFELLVPS ESLRARIGAG ADLASLRRQA LSEGLLDLKR
CGEAKVARGL TCQEEVLRVC T
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