| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5001 |
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| Symbol | |
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| ID | 6113993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5524519 |
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| End bp | 5526855 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624815 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001751846 |
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| Protein GI | 170724158 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0280041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAA TTTCCCGTTG GCCTGCGCGC GCGTCGCGTT TCACCTTGCA ACCCTTGGCC
GCTGGCGTTC TGCTGGCTGC TTCCAATGGC AGCTTCGCCG AAGAACCGGT CAGCACTGCC
CCCGCCGTGG CGCAGGACGC CAAGCTCGGC ACCGTCACCG TCAATGCCCG CCGCCGTGAG
GAAACCGCAC AAAGCGTGCC CACGCCGATC AGCGTGCTCA ATAGCGAAAC TCTGGAAACA
CAGCGCATCT ACCGTGTGCA GGACCTGCAA CAACTGGTGC CAAGCACCAA CGTGTCCTAT
GTGCATGCCC GCCAGTCGAG CATCTCGATC CGCGGCCTGG GCAACAACCC GGCTAGCGAT
GGCCTGGAAG GCAGCGTTGG CATCTACCTG GACAACGTCT ACCTCGGGCG CCCTGGCATG
GCGGTGTTCG ACCTGCTGGA TGTCGAGCAA CTGGAAGTAC TGCGTGGCCC GCAAGGTACG
CTGTTCGGCA AGAACACCAC GGCCGGGGTG CTGAACATCA CCTCGCGCAA GCCGACCTTC
CACCGTGAGG GCAGCATCCA GCAGTCCATT GGCGAGGATG GTTATCTGCA GACCCAGGGC
AGTTTTTCCG GGCCCATCAG CGACACCTTG GCCGGGCGAA TCAGTGCCTA CCGTACCGAA
GACGACGGCT ATGTGAAGAA CATTCACAAC GGCGATCATC TGAACGGCGG CAAGCGGCAG
GGCTTTCGGA CCCAGTTGCT GTTCCAGCCG AGCGAAACCT TTAACCTGCG CTGGATCGGC
GAGTACAACG AAGAGGATTC CAACAACGGC ATCCTCAGCC TGTACAGCTC CGGGCCGACC
ATCAATGGCG TCAATCGTTA CGAAAGCCTG GCCGCCCTGG CCGGTGCCAC ACTGGTCTCG
GGCAAGGACC GCAAGGTCAA TTTCGATTCC GATCAGCAGG TAACGGTGTT CCAGGGAGGT
ACCTCCGTGG AGGCCAACTG GACGCTGCCC AATGACTTCA CCCTCACCTC GATCACCGCC
TACCGTTGGT GGGACTTCAC CCCGCGCAAC GACGATGGTC TCAACGTGCC GGCGGCCTAC
AACGCAGGGG TCGCGGTGCG CGACAAGCAG TATTCCCAGG AAATCCGCCT GGCGTCGCCC
ACCGGAGGCT TTTTCGATTA TGTACTCGGT GCCTACTACT TCAAGCAGGA CCTGGACAAC
AAATCCTTCA CCTATTACGG CCCGCAGGCC GACGTCTGGA GCGCTACGCC CGCCGGTGCC
CTGAACGACG TCACTACACT GGGTGACGGG CACATCGATA CCGACAGCTA TGCCCTGTTC
GCCCAAGGCA CCTGGCACGT CACCGACCGC CTCGACTTCA CCGCCGGTGT GCGCGGCACC
TATGAAGAGA AGAGCGCGTC GGTGACACGT GATGCGCCGG TTGGCGGAGC GCTCGTGACC
GGCGCCGCTG CTGCGGCGCG CCAGGGCAGG GTGGGGGCCT ATGACTCGGG TGACCTCAAC
CAGTACAGCT TCAGCCCCTC CGGCCTGCTC GGCCTGAGCT ACCGCTTCAA CGAGCAACTT
CTGGGCTACG CCACCCTGAC CCACGGTGAA AAATCCGGAG GTATAAACCT CACCGTCGGC
GCGGCGCCGC GGCTGGGTAC CGACTCGTTG TTGGTCGGTA CGGAACGGGT CAACAACGCC
GAAGTCGGTC TCAAGAGCAC CCTGTTCGAT GACCGCCTGC AACTCAATGC CAACTTGTTC
TGGGCCGAGG TACATGGATA CCAGGCCAAC GTCTACGACC ACATCAACCG CGTGCAGTAC
CTGGCCAACG CCGGGCGTGT GCGTTCGCGG GGCCTTGAGT TCGAGGCCAC CGCGCTGCCG
ATTCGTGGGC TGACGGTCAA TTTCAATGGC TCGTGGAATG ACGTGCGCTA CACCGAGTAC
GACGATGCGC CGTGCCCACC CGAGGTCAGC TTGGTCAATG CCACTGCCAC CTGCGACCTG
TCCGGCCACC AGGTGGTCGG CGCCTCCAAG TACATCGCGA ACCTCAACGG CCAGTACAAA
TGGCAGCTGA CCGAGCACAT CGAGCCTTAT GTCACCGCCA GCTATGCCTT CCGCTCCAAG
GCGGTCGGCA CCATCGACGA TTCCGACTTC GGCCAGATCC CCAGCTACGC GCTGGTCAAC
CTGTCCACTG GCGTGCGCCT GGACCAGGGC GATGGCGTGC TCGATCTGTC GCTGTGGGTG
AAGAATGCCG GCGACAAGAC CTACTTCACC AGCCTGTGGA ATTCCGCCAA CGGCGGCTAT
GCCGGCGTGC TTGGCACCCC GCGCACCTTC GGCGCCACCG CCCGTTATGA CTTTTGA
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| Protein sequence | MSRISRWPAR ASRFTLQPLA AGVLLAASNG SFAEEPVSTA PAVAQDAKLG TVTVNARRRE
ETAQSVPTPI SVLNSETLET QRIYRVQDLQ QLVPSTNVSY VHARQSSISI RGLGNNPASD
GLEGSVGIYL DNVYLGRPGM AVFDLLDVEQ LEVLRGPQGT LFGKNTTAGV LNITSRKPTF
HREGSIQQSI GEDGYLQTQG SFSGPISDTL AGRISAYRTE DDGYVKNIHN GDHLNGGKRQ
GFRTQLLFQP SETFNLRWIG EYNEEDSNNG ILSLYSSGPT INGVNRYESL AALAGATLVS
GKDRKVNFDS DQQVTVFQGG TSVEANWTLP NDFTLTSITA YRWWDFTPRN DDGLNVPAAY
NAGVAVRDKQ YSQEIRLASP TGGFFDYVLG AYYFKQDLDN KSFTYYGPQA DVWSATPAGA
LNDVTTLGDG HIDTDSYALF AQGTWHVTDR LDFTAGVRGT YEEKSASVTR DAPVGGALVT
GAAAAARQGR VGAYDSGDLN QYSFSPSGLL GLSYRFNEQL LGYATLTHGE KSGGINLTVG
AAPRLGTDSL LVGTERVNNA EVGLKSTLFD DRLQLNANLF WAEVHGYQAN VYDHINRVQY
LANAGRVRSR GLEFEATALP IRGLTVNFNG SWNDVRYTEY DDAPCPPEVS LVNATATCDL
SGHQVVGASK YIANLNGQYK WQLTEHIEPY VTASYAFRSK AVGTIDDSDF GQIPSYALVN
LSTGVRLDQG DGVLDLSLWV KNAGDKTYFT SLWNSANGGY AGVLGTPRTF GATARYDF
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