| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4996 |
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| Symbol | |
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| ID | 6113988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5517244 |
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| End bp | 5518230 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624810 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001751841 |
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| Protein GI | 170724153 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.445077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA ACATCCATTC AACGCTGCCC GGCAATTCAG CTCCCGAGGC AGCCCAAACC
CTGCTGGCCT TGCTGCATGC CCAAGGCGAA GTGGCTCGCC TGAGCGAACG TGAACAGCTC
TACAGCTCGT TGCTCGACAG CGTCAACGCG GTGCTCTGGG CGTTCGACTG GGAAACACGC
CAGGTGCTCT ACGTCAGCCC CGCCTACGAA CGCATCTTCG GCCGCCCCAC GAGCCTGGTA
TTGGCGGACT TCAACGAGTG GCGCGACAGC ATCTACCCCG ATGACCTGGA ATACGCCGAA
CGTAGCCTGG CCCAGGTGCT GATCAAAGGC GCGGTTGAAG ACCGCGAGTA CCGCATTCTC
AATGCAAACG GCCAGGTGCG CTGGCTCAGT GACAAGTGCT ACATCAACCA GCAGCAGGAA
GGTGACCGGG TGATAATCGT CGGCATTGCC GAAGACATCA CCGACAAGAA GCAGCTTGAA
GGCGAGCTGC ATCGCTTGGC CACCACGGAC GTGCTGACCC AGAGCAGCAA CCGCCGGCAC
TTTTTCGAAT GTGCAGGCCA AGCCTTCGAC AGTGCACGCG AAGACGGCAC ACCATTGGCA
TTCCTGCTGC TGGACATCGA TGACTTCAAG CAGATCAACG ACAGCTACGG CCATCAGGAA
GGCGATCAGG TGCTGCAACG CATTGCCGAC AGCGGCAAGG CAGTGCTGCG CCGCGGTGAC
CTGTTCGGGC GTATTGGTGG CGAGGAATTT GCCGCGGTGT TCCCCGGCTG CAATGCACAG
GTTGCCGAGC AGATTGCCGA GCGCCTGCAG CGCGAGATTC AGCGGCTGAG CTTCAGCCAT
GGCGAGCAGG TGTATGGAGT GACGGTAAGC CAGGGGCTGA CCGGGCTCAC GGCCGAGGAT
GACTCACTGG ACAGCCTCTT CGCTAGGGCT GATGCGGCAA TGTACCGGGC CAAGCGGCAG
GGCAAGAATC AGATAGTGCG GGGCTGA
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| Protein sequence | MAKNIHSTLP GNSAPEAAQT LLALLHAQGE VARLSEREQL YSSLLDSVNA VLWAFDWETR
QVLYVSPAYE RIFGRPTSLV LADFNEWRDS IYPDDLEYAE RSLAQVLIKG AVEDREYRIL
NANGQVRWLS DKCYINQQQE GDRVIIVGIA EDITDKKQLE GELHRLATTD VLTQSSNRRH
FFECAGQAFD SAREDGTPLA FLLLDIDDFK QINDSYGHQE GDQVLQRIAD SGKAVLRRGD
LFGRIGGEEF AAVFPGCNAQ VAEQIAERLQ REIQRLSFSH GEQVYGVTVS QGLTGLTAED
DSLDSLFARA DAAMYRAKRQ GKNQIVRG
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