| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4993 |
|---|
| Symbol | |
|---|
| ID | 6113985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5513207 |
|---|
| End bp | 5513851 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641624807 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001751838 |
|---|
| Protein GI | 170724150 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.571534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTTTG ACCGCTTGCT TGAAGGCTTG CTCGACACCC TGCTGATGGT CGGCGTGTCG
TCTTTGATCG CCCTGCTGGT GGGCGTGCCA ATGGCCGTGC TGCTGGTGAC CAGTGATAAA
GGCGGCATTT TCGAGGCGCC CCTGCTGAAC CGGGTGCTGA GCGCCTTCGT CAACCTGTTC
CGTTCAATCC CGTTTCTGAT CCTGATGGTC GCACTGATCC CGTTCACCCG CCTGCTGGTC
GGCACCACCT ATGGTGTGTG GGCCGCCGTG GTGCCGCTGA CCATCGCCGC TACGCCGTTC
TTCGCACGGA TTGCCGAGGT GAGCCTGCGC GAAGTGGACC ACGGCCTGGT GGAGGCGGCT
CAGGCCATGG GGTGTCGACG TTGGCACATC GTCTGGCATG TATTGCTGCC CGAAGCACTG
CCAGGGATCG TCGGCGGTTT CACCATTACC CTGGTGACGC TGATCAACTC CTCCGCCATG
GCTGGGGCGA TCGGTGCGGG TGGGTTGGGG GATATTGCCT ATCGGTATGG GTATCAACGC
TTCGACAGCC AGATCATGCT GACGGTGATT GCCATGCTGG TGGCGCTGGT GGCGGTGATT
CAGGTGGGTG GGGACCGGTT GGCGAAAGGG TTGAACAAGC GCTGA
|
|---|
| Protein sequence | MWFDRLLEGL LDTLLMVGVS SLIALLVGVP MAVLLVTSDK GGIFEAPLLN RVLSAFVNLF
RSIPFLILMV ALIPFTRLLV GTTYGVWAAV VPLTIAATPF FARIAEVSLR EVDHGLVEAA
QAMGCRRWHI VWHVLLPEAL PGIVGGFTIT LVTLINSSAM AGAIGAGGLG DIAYRYGYQR
FDSQIMLTVI AMLVALVAVI QVGGDRLAKG LNKR
|
|---|
| |