Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4965 |
Symbol | |
ID | 6113957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5482760 |
End bp | 5484073 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641624779 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001751810 |
Protein GI | 170724122 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00226038 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACTC CGGTCTGGTT CCCGCAAAGC TTCTTCGCCC GTACCCTGTG GCTGGTGCTG ATCGTTGTCC TGTTCTCCAA GGCGCTGACC CTGGTCTACC TGCTGATGAA CGAGGACGTG CTGGTCGATC GACAGTACAG CCATGGTGTG GCGCTGACGC TGCGCGCCTA TTGGGCGGCC GATGAAGAAA ACCGCGACAA GATTGCCGAA GCCGCAGGCC TGATCCGGGT GACCGGCTCC GGCGTGCCGG AGGGCGAGCA GCACTGGCCC TACAGCGAAA TCTATCAACG GCAGATGCAG GCCGAGCTGG GCGAAGATAC CGAAGTGCGC TTGCGCATCC ACGCACCGCC TGCGTTGTGG GTCAACGCGC CGAGCCTCGG CCCGGGCTGG CTGAAAGTGC CGCTTTATCC GCACCCGTTG CGTGGCCAGA AAATCTGGAA CGTACTTGGC TGGTTCCTGG CCATCGGCCT GTTGTCCACC GCTTCGGCGT GGATCTTCGT GCGCCAGCTC AACCAGCCGC TCAAGCGTCT GGTGTTCGCT GCCCGTCAGT TGGGCCAGGG CCGCAGTGTA CGTCTGCCGA TCAGTGATAC GCCGAGCGAA ATGACCGAGG TGTATCGCGC GTTCAACCAG ATGGCCGAGG ATGTCGAGCA GGCCGGGCGT GAGCGCGAGC TGATGCTGGC GGGTGTGTCC CACGATTTGC GCACGCCACT GACGCGCCTG CGGCTGTCGC TGTCCTTGCT GAACAGTGAC AACGACCTGA GCGACGACAT GGTCCGCGAC ATCGAGGACA TGGATGCGAT TCTTGACCAG TTCCTGGCCT TCATTCGCGA TGGCCGCGAC GAGCCGCTGG AGGAGGTAGA CCTGGCCGAC CTGGTGCGCG AGGTGGTGGC GCCCTACAAC CAGCCGCAAG AGCGTGTGCG TTTGTGCCTG GAGCCTATTC CGCCATTCCC GCTGCGCAGG GTTTCACTCA AGCGCATGCT GGGCAACCTG ATCGGTAACG CGCTGCATCA TGCGGGCAAG GGGGTCGAGG TGGCCGCCTA TGTGTCGGGC GACGAGAGCG CGCCTTATGT GGTGCTGAGC GTGCTGGACC GGGGGGCAGG GATCGATGAG TCGGAGCTGG AGACCATCTT CAACCCGTTC ATTCGTGGGG ACCGGGCGCG GGGTGGCAAG GGCACCGGGT TGGGGCTGGC GATCGTTAAG CGGATCGCCG CCCAGCATGG CGGTAATGTC GAGTTGCGCA ACCGGTCCGG GGGCGGGATC GAGGCGCGGG TAAGGTTGCC GTTGGGGCTT TTGCTACCGC GTAATGCGGT TTGA
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Protein sequence | MKTPVWFPQS FFARTLWLVL IVVLFSKALT LVYLLMNEDV LVDRQYSHGV ALTLRAYWAA DEENRDKIAE AAGLIRVTGS GVPEGEQHWP YSEIYQRQMQ AELGEDTEVR LRIHAPPALW VNAPSLGPGW LKVPLYPHPL RGQKIWNVLG WFLAIGLLST ASAWIFVRQL NQPLKRLVFA ARQLGQGRSV RLPISDTPSE MTEVYRAFNQ MAEDVEQAGR ERELMLAGVS HDLRTPLTRL RLSLSLLNSD NDLSDDMVRD IEDMDAILDQ FLAFIRDGRD EPLEEVDLAD LVREVVAPYN QPQERVRLCL EPIPPFPLRR VSLKRMLGNL IGNALHHAGK GVEVAAYVSG DESAPYVVLS VLDRGAGIDE SELETIFNPF IRGDRARGGK GTGLGLAIVK RIAAQHGGNV ELRNRSGGGI EARVRLPLGL LLPRNAV
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