Gene PputW619_4963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4963 
Symbol 
ID6113955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5481249 
End bp5481788 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID641624777 
Producthypothetical protein 
Protein accessionYP_001751808 
Protein GI170724120 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000828049 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAAAG TCCCCGCCGT GCTTACAGTT CACCACCTCA TTCGCAGGGT GTGCTTCGTG 
AAGACATTTG ACCATCTGAC TGTAATCGGC CTGCGCGAGT GGGTCGCCTT GCCCGACCTC
GGTGTGGCGG GCCTGCGCGC CAAGATCGAT ACCGGTGCCA GCACCTCCAG CCTGCATGCC
ACCGAGGTGG AGCCCTTCGA GCGCGACGGC CAGCCATGGG TGCGCTTTAC GGCCCACCTG
GGCTCGATCG TGCAATTGCG CCACCGCCGC TGCGAAGCCC CGCTGGTCAC CATGAAGACC
ATCAAGAGCT CCAACGGCCA TGCGCAGACC CGTTACGTGA TCCGCACCTC GTTGGCGTTG
GGCGATGGCG TCTGGGAGGT AGAGTTCACC CTGGCCTGCC GCAAGAACAT GCGCTATCGC
CTGCTGCTCG GCTCCAAGGC ACTCATTCAC GGCCAGTTGG TGGTCAACCC CGGGCTCAAG
TACGTGCAAG ACAAACCGGC CTACCCGGCC ACCCTATCTC CTGTCACAGG TGCTGCATGA
 
Protein sequence
MQKVPAVLTV HHLIRRVCFV KTFDHLTVIG LREWVALPDL GVAGLRAKID TGASTSSLHA 
TEVEPFERDG QPWVRFTAHL GSIVQLRHRR CEAPLVTMKT IKSSNGHAQT RYVIRTSLAL
GDGVWEVEFT LACRKNMRYR LLLGSKALIH GQLVVNPGLK YVQDKPAYPA TLSPVTGAA