Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4963 |
Symbol | |
ID | 6113955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5481249 |
End bp | 5481788 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624777 |
Product | hypothetical protein |
Protein accession | YP_001751808 |
Protein GI | 170724120 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4067] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000828049 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAAAG TCCCCGCCGT GCTTACAGTT CACCACCTCA TTCGCAGGGT GTGCTTCGTG AAGACATTTG ACCATCTGAC TGTAATCGGC CTGCGCGAGT GGGTCGCCTT GCCCGACCTC GGTGTGGCGG GCCTGCGCGC CAAGATCGAT ACCGGTGCCA GCACCTCCAG CCTGCATGCC ACCGAGGTGG AGCCCTTCGA GCGCGACGGC CAGCCATGGG TGCGCTTTAC GGCCCACCTG GGCTCGATCG TGCAATTGCG CCACCGCCGC TGCGAAGCCC CGCTGGTCAC CATGAAGACC ATCAAGAGCT CCAACGGCCA TGCGCAGACC CGTTACGTGA TCCGCACCTC GTTGGCGTTG GGCGATGGCG TCTGGGAGGT AGAGTTCACC CTGGCCTGCC GCAAGAACAT GCGCTATCGC CTGCTGCTCG GCTCCAAGGC ACTCATTCAC GGCCAGTTGG TGGTCAACCC CGGGCTCAAG TACGTGCAAG ACAAACCGGC CTACCCGGCC ACCCTATCTC CTGTCACAGG TGCTGCATGA
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Protein sequence | MQKVPAVLTV HHLIRRVCFV KTFDHLTVIG LREWVALPDL GVAGLRAKID TGASTSSLHA TEVEPFERDG QPWVRFTAHL GSIVQLRHRR CEAPLVTMKT IKSSNGHAQT RYVIRTSLAL GDGVWEVEFT LACRKNMRYR LLLGSKALIH GQLVVNPGLK YVQDKPAYPA TLSPVTGAA
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