| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4954 |
|---|
| Symbol | |
|---|
| ID | 6113946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5472809 |
|---|
| End bp | 5475154 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641624768 |
|---|
| Product | oxidoreductase alpha (molybdopterin) subunit |
|---|
| Protein accession | YP_001751799 |
|---|
| Protein GI | 170724111 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0000466466 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCGT ACCAGCCTCT TCCAGACAAC GCCCCAGCCT CCCCACCACG CTACAAGCCC
TACCACGGCC CCGCTGGTGG CTGGGGCGCC TTGCGCAGCG TGGCCAAGGC CTGGGTCGGC
AGCGACAATG CGTTGAAGAA TCTTCGCGCC CTGCTCAAGA CCAACCAGAA TGGCGGCTTC
GACTGCCCCG GTTGCGCCTG GGGCGACTCG CCCGAAAGCG GCATGGTCAA GTTTTGCGAG
AACGGCGCCA AGGCGGTCAA CTGGGAAGCC ACCAAGCGCC GAGTCGATGC GGCCTTCTTC
GCCCGCTACA GCGTCAGCGC GCTGCTTGAG CAGAGCGACT ACTGGCTGGA ATACCAAGGC
CGCCTGACCG AACCGATGGT CTACGACCCG GCCAGCGACC GCTATCAGCC GATCGCCTGG
GATGCAGCCT TTGCCCTGAT CGCCCGAGAG CTGAACAACC TGGCAAGCCC CGATCAGGCC
GAGTTCTATA CCTCCGGGCG GGCCAGCAAC GAAGCGGCGT TCCTGTACCA GCTGTTCGTG
CGTGCATACG GCACCAACAA CTTCCCCGAC TGTTCGAACA TGTGCCACGA GGCTAGCGGC
GTAGCCTTGG GGCAAAGCAT CGGTGTGGGC AAGGGCACTG TCACCTTCGA TGATTTCGAG
CACGCCGATG CGATCTTCGT CTGGGGCCAG AACCCCGGCA CCAACCACCC CCGCATGCTC
GACCCGCTAC GCGATGCCGT AAAGCGTGGC GCCCAGGTGG TGTGCATCAA CCCGCTAAAG
GAGCGCGGCC TGGAGCGCTT CCAGCACCCG CAGAACCCGC TGGAAATGCT GACCAACAGC
GACCGGCCGA CCAACACGGC GTTCTTCCGC CCGGCCTTGG GCGGCGACAT GGCGCTGTTG
CGCGGCATGG CCAAATTCCT GCTGCAGTGG GAGCGTGAGG CGCAGGCCAA AGGCGAGCCG
GCGGTATTCG ATCACGTATT CATCGCCGAG CATGGTCACG GTGTCGATGA GTACCTGGCT
GCAGTGGACG CCACCTCGTG GGCGCACATT CAGGAGCAGT CGGGCCTTGA GCTTGCTGAC
ATCGAGCTGG CTGCACGCAT GTACTGCCGT GGCAAACGGG TGATCATGTG CTGGGCGATG
GGCATCACCC AGCACCGCCA CTCGGTGCCG ACCATTCAGG AAATCGTCAA CCTGCAGATG
CTGCGCGGCA ACATCGGAGT GCCTGGCGCA GGGCTGTGCC CGGTACGCGG CCACAGCAAC
GTGCAGGGCG ACCGCACCAT GGGTATCAAT GAACGCCCGC CGGTGGCGCT GCTCGATGCC
ATCGAAAAAC GCTTCAATTT CCCGGTACCG CGGCACAATG GCCACAACAC CGTCGAAGCG
ATCCACGCCA TGCTCGACGG CCGCGCCAAG GTGTTCATCG GGCTGGGTGG CAACTTCGCC
CAGGCCACCC CGGATACCGA GCGTACCGCC CAGGCCCTGC GCAACTGCGC GCTGACCGTG
CACATCAGCA CCAAGCTCAA CCGCAGCCAC CTGATCCACG GCAAACAGGC GCTGATTCTG
CCGTGCCTGG GCCGCACCGA TATCGACCTG CAGGCCGACG GGCCGCAGGC GGTCACCGTT
GAAGACTCTT TCAGCATGGT CCATGCCTCC AACGGCCAGC TCAAGCCGCT ATCGACCCAG
ATGCGCTCAG AGCCGGCAGT GGTTGCCGGC ATCGCCGCTG CCACACTTGG CAAAAACCCG
GTCGACTGGC ACTGGCTTGT GGCCGACTAC AACCGTATCC GGGACTTGAT CGGCGACACG
ATTGCAGGCT TTGCCGACTT CAACCAGCGC CTGAGCCACC CAGGGGGCTT CTACCTGGGC
AACAGTGCAG CCAGCCGCCA GTGGAAGACC ACCAACGGCC GCGCCAATTT CAAGGCCAAC
CTGCTGCCGG ACACCCTGCT CGACGAGCGG GTTCGCGCCA GCGGCCAGGT ACCGGACCTG
ATCATGCAGT CCATGCGCTC GCACGATCAG TACAACACCA CCATCTATGG CCTGGACGAC
CGCTACCGTG GCGTGCGCGG CCAGCGTGAC GTGCTGTTCG TCAACGAGGC CGACATCATT
CGCCTGGGCT TCCAGCCGGG GCAGAAGGTC GACATCGTCT CGTTGTGGGG CGATTCGCAT
GTGCGCCGTG TGCAGGGCTT CACCCTGCTG GCTTTCGATA TCCCGGCTGG GCAGGCGGCG
GCGTACTACC CGGAAGTGAA TCCGCTGATC CCGTTGGAAA GCATCGGTGA GGGCAGCCAT
ACACCGACCT CCAAGTTCGT CGCCATCAAG TTGGAGCGGG CGCGCGACGA CGGGCGAATC
GTGTAA
|
|---|
| Protein sequence | MTSYQPLPDN APASPPRYKP YHGPAGGWGA LRSVAKAWVG SDNALKNLRA LLKTNQNGGF
DCPGCAWGDS PESGMVKFCE NGAKAVNWEA TKRRVDAAFF ARYSVSALLE QSDYWLEYQG
RLTEPMVYDP ASDRYQPIAW DAAFALIARE LNNLASPDQA EFYTSGRASN EAAFLYQLFV
RAYGTNNFPD CSNMCHEASG VALGQSIGVG KGTVTFDDFE HADAIFVWGQ NPGTNHPRML
DPLRDAVKRG AQVVCINPLK ERGLERFQHP QNPLEMLTNS DRPTNTAFFR PALGGDMALL
RGMAKFLLQW EREAQAKGEP AVFDHVFIAE HGHGVDEYLA AVDATSWAHI QEQSGLELAD
IELAARMYCR GKRVIMCWAM GITQHRHSVP TIQEIVNLQM LRGNIGVPGA GLCPVRGHSN
VQGDRTMGIN ERPPVALLDA IEKRFNFPVP RHNGHNTVEA IHAMLDGRAK VFIGLGGNFA
QATPDTERTA QALRNCALTV HISTKLNRSH LIHGKQALIL PCLGRTDIDL QADGPQAVTV
EDSFSMVHAS NGQLKPLSTQ MRSEPAVVAG IAAATLGKNP VDWHWLVADY NRIRDLIGDT
IAGFADFNQR LSHPGGFYLG NSAASRQWKT TNGRANFKAN LLPDTLLDER VRASGQVPDL
IMQSMRSHDQ YNTTIYGLDD RYRGVRGQRD VLFVNEADII RLGFQPGQKV DIVSLWGDSH
VRRVQGFTLL AFDIPAGQAA AYYPEVNPLI PLESIGEGSH TPTSKFVAIK LERARDDGRI
V
|
|---|
| |