Gene PputW619_4947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4947 
Symbol 
ID6113939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5467258 
End bp5468667 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content67% 
IMG OID641624761 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001751792 
Protein GI170724104 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.669147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000241398 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCCCG AGATACAGAT CGACAGCCAG GCCCAGGTGC TGCTGGTCGA CGACGACCCA 
CACCTGCGCC AGGCCTTGAG CCAAACCCTC GACCTGGCGG GGCTCAAGGT GGTTGCCCTG
GCCGACGCCC AAGGCCTGGC CGAGCGCCTG GAGCCCGACT GGCCTGGCGT GGTCGTCAGC
GACATCCGCA TGCCCGGCAT CGATGGCTTG CAACTGCTCG AACAATTGCA CGGGCGTGAC
AACGAACTGC CAGTGCTGCT GATCACCGGC CACGGCGATG TGCCCCTGGC GGTGCAGGCC
ATGCGCGCTG GCGCCTACGA CTTCCTTGAA AAGCCCTTTG CCAGTGAAGC TCTGCTCGAC
AGCGTGCGCC GCGCGCTGGC CCTGCGCCGG CTGGTGCTCG ACAACCGCAG CCTGCGCCTG
GCCTTGAGCG ACCGCCAGCA ACTGGCCACC CGCCTGGTCG GCCATTCGCC CGCCATGCAG
CGCCTGCGCG AACAGATCGG TGCCCTGGCC GGTACCCGCG CCGACGTGCT CATCCTCGGC
GAAACCGGCG CTGGCAAGGA GGTGGTGGCC CGCGCCCTGC ACGATCTGTC CAGCCGCCGC
GATGGGCCAT TCGTGGCCAT CAATGCCGGC GCACTGGCCG AGTCGGTGGT CGAAAGCGAG
CTGTTCGGCC ATGAGCCCGG CGCTTTCACC GGCGCGCAGA AGCGCCGCAT CGGCAAGTTC
GAGTTCGCCA ATGGCGGCAC GCTGTTCCTC GACGAAATCG AAAGCATGAG CCTGGACGTG
CAGGTGAAGT TGCTGCGCCT GCTGCAGGAG CGAGTAGTCG AGCGCCTGGG CGGCAACCAG
CTGATCCCGC TGGACATCCG CATCATTGCC GCAACCAAGG AGGACCTGCG CCAGTCCGCC
GACCAAGGCC GCTTCCGTGC CGACCTTTAC TACCGCCTGA ACGTGGCACC GCTGCGCATC
CCGCCGCTGC GCGAGCGAGG GGATGACATC CTGGTGCTGT TCCAGCATTT CGCCGATACC
GCCAGCCAAC GCCACGGCTT GCCACCGCAA ACCCTGCAGC CGGCGCACCG GGCCATGCTG
CTGCGCCATG CCTGGCCAGG CAATGTGCGC GAACTGCAAA ACGCCGCCGA GCGTTTCGCC
CTTGGCCTGG AGCTGGCGCT CGATCACCAG GCCCCCGCTG CCGCAGCACC CACAGCCCCG
CTTCAGCTGG GCAACCTCAG CGAACAGGTA GAGCAGTTCG AGCGTTCGTT GATTGCCGCC
GAACTGGGCC AGCCGCACAG CTCCATGCGC AGCCTGGCCG AGGCACTCGG TATCCCGCGC
AAAACCTTGC ATGACAAGCT GCGCAAGCAC GGCCTCAGTT TTGACGGTGG CCACAGCGGG
CCTGACGACC ACGAGGACAA CCGCCCATGA
 
Protein sequence
MTPEIQIDSQ AQVLLVDDDP HLRQALSQTL DLAGLKVVAL ADAQGLAERL EPDWPGVVVS 
DIRMPGIDGL QLLEQLHGRD NELPVLLITG HGDVPLAVQA MRAGAYDFLE KPFASEALLD
SVRRALALRR LVLDNRSLRL ALSDRQQLAT RLVGHSPAMQ RLREQIGALA GTRADVLILG
ETGAGKEVVA RALHDLSSRR DGPFVAINAG ALAESVVESE LFGHEPGAFT GAQKRRIGKF
EFANGGTLFL DEIESMSLDV QVKLLRLLQE RVVERLGGNQ LIPLDIRIIA ATKEDLRQSA
DQGRFRADLY YRLNVAPLRI PPLRERGDDI LVLFQHFADT ASQRHGLPPQ TLQPAHRAML
LRHAWPGNVR ELQNAAERFA LGLELALDHQ APAAAAPTAP LQLGNLSEQV EQFERSLIAA
ELGQPHSSMR SLAEALGIPR KTLHDKLRKH GLSFDGGHSG PDDHEDNRP