| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4944 |
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| Symbol | |
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| ID | 6113936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5464009 |
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| End bp | 5464551 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624758 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001751789 |
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| Protein GI | 170724101 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000118496 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACATAA TCGCTACAGA CATACCCGAC GTACTGATCA TCGAGCCCAA GCTCTTCGGT
GACAGCCGCG GCTTTTTCTT CGAAAGCTTC AATGCCCGCG AGTTTGCCAG GCTGACAGGC
TTTGACGCCC ATTTCGTCCA GGACAACCAC TCCCGCTCAC AGCGCGGCGT GCTCCGCGGC
CTGCACTACC AGATCGATAA CCCCCAGGGG AAACTGGTGC GGGTTGTTCA GGGCGAAGTG
CTGGATGTGG CCGTGGACAT CCGCCGTAGC TCACCCACAT TCGGCCGCTG GGTAGCCACC
CGCCTGTGCG CCGAAGACCA CCGCCAGTTC TGGATCCCGC CAGGGTTCGC CCATGGTTTT
TTGGTGTTGA GCGAATCGGC TGACTTCCTG TACAAGACCA CCGACTACTA CAACCCCGCC
GCCGAGCGCT GCATCCGCTG GGATGATCCA CAGCTGGCCA TCGACTGGGG CGTGGAAGCA
CCGCTGCTGT CGGCCAAGGA CCAGGCCGGC GCGCTGCTGG CTGACGCGGA CCTGTTCCCA
TGA
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| Protein sequence | MNIIATDIPD VLIIEPKLFG DSRGFFFESF NAREFARLTG FDAHFVQDNH SRSQRGVLRG
LHYQIDNPQG KLVRVVQGEV LDVAVDIRRS SPTFGRWVAT RLCAEDHRQF WIPPGFAHGF
LVLSESADFL YKTTDYYNPA AERCIRWDDP QLAIDWGVEA PLLSAKDQAG ALLADADLFP
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