| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4943 |
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| Symbol | |
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| ID | 6113935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5460917 |
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| End bp | 5463817 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641624757 |
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| Product | hypothetical protein |
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| Protein accession | YP_001751788 |
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| Protein GI | 170724100 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases
[COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.870078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000072077 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCTCA GCACCCTGAT CCAGCGTTCC AGCCTGCCAA GCCCTTCGCT CAGCGAAGCC
CAGGCGCATG CCTTGCTTCA GGCGCATTAC GACCTGGCCG GCAGCCTGTC CAGGCTGGGT
AGCCAGCAAG ACCTGAACTT GCGTCTGGAT ACTGGGCAGG AGCGGTTTGT GCTCAAGGTT
TGCCACGGCA ATTATGCCCA GATGGAACTG GAGGCGCAGC ATGCGGCGCT GGCTTACCTG
CGCGAGCAAG GGTTGCCGGT ACCTGCCGTA CGCCCGGCAC GCGACGGCCA GTCGCTGTTG
GCACTGAACA TCGATGGCCA ACCGCTGCGC GCCCGTCTGC TCGATTATAT AGAAGGGCAG
CCGCTGACCC GCCTCAAGCA CATGCAGCCT CGCCTGATGG CCGAACTGGG CGCGCTGTGC
GCCCGGGTCG ACAAAGCCTT GGCCGATTTC GACCACCCAG GCCTGGTGCG CACCCTGCAA
TGGGACCCGC AGCACGCCCA GGCGCTCATC GAGCATTTGT TGCCAGTGCT GCAGGATGCC
GGGCAGCGCA CCCGCCTGGA GCAGGCTACC CGCCTGGCCG CCGCGCACCT GGCACCGTTG
GTCGACGACC TGCCGAGCCA GGCCGTGCAC CTGGACATCA CCGATGACAA TGCCGTCTGG
GCCCGCGATG AGCAGCGCCA GTGGCAGCTG CAGGGCATCA TCGATTTCGG TGACCTGGTG
CGTACCTGGC GCATCGCCGA CTTGTCGGTG ACCTGCGCGG CCTTGCTGCA CCATGCCGAA
GGCGACCCGC TGCGCATCCT GCCGGCCGTG CGCGCCTACC ATGCCCTCAA CCCGCTGAGC
GAAACCGAGT TGCGCGCCCT GTGGCCGCTT GTGCTCAACC GCGCTGCCGT GCTGGTGCTC
AGCAGTGAGC AACAACTGGC CGTGGACCCC GGCAACCAGT ACACCCGTGA CAACATCGCC
CATGAGTGGG AGATCTTCGA TACCGCTACC GCCGTGCCAT TCGCGCTGAT GGAAGCGGCC
ATTCTGCAGG CCGCCGGCAT CGAACCGAGC CGACCGGACC TGGCCGATTG CGCCCTGTTG
CTGCCAGACC TCGCCCGTGA GGCGGTCACG CGCGTCGACC TGGGCGTGCT GAGCCCCCTC
TGCGAGGCCG GTAACTGGGA GCAGCCCGGC TTCGATCAGC GTCAGCTGAC GGCCCAGCCC
GCGCCTGCTT GCAGCCTGCA TGGCCAGTAT CGCCTGTCGC AAACCCACAT CGACCGCCCT
GATGAGCCGG CCACCTGCGC CCTGGGCGTC GAACTGCACG TGCCTAACGG CAGTGCGGTA
CAGGCCCCGC AAGCCGGGAC CTGGCAGCGC CATGGCGATG GCCGTGGCTG CTTGCGCACG
GCACAGTGGG CCTTGTGGCT CAGTGGCCTG GAAGATACCC CCGCAGATGG CCAGGCCGTG
GCCAAGGGGC AGGCGCTGGG CAGCAGCTGT GGTTTTCTCA GTGTGCAGCT GTGCCTGGAC
GCCAGCATCC AGCCGCCACT GTTCGCTGCA CCTTCCCAGG CTGCCGCCTG GCTGGCGCTG
TGCCCCTCGC CTGCAGCTTT GCTGGGTTTC GACTGCGATG CCGAGCCGCT GGCCGACCCC
CAGGCATTGC TGGCCCGCCG CGACGCCAGC TTTGCCCGCT CGCAGAAGCA CTACTATGCA
CAGCCACCAC ACATCGAGCG CGGCTGGCGC AACTACCTGA TCGACATGCA AGGCCGCTCC
TACCTCGACA TGCTCAACAA CGTCGCGGTA CTCGGCCATG GTCACCCTCG CATGGTGGCC
GAGTCGGCAC GGCAGTGGTC GTTGCTCAAT ACCAACTCGC GCTTCCATTA CGCGGCCATT
GCCGAGTTTT CTGAACGCCT GCTCAAGTTG GCGCCGGCGG GCTTTGACCG AGTGTTCTTG
GTCAACAGTG GTACCGAGGC CAACGACCTG GCCATTCGCC TGGCCTGGGC CTACAGCGGC
GGTCGCGACC TACTCAGCGT GCTGGAGGCC TACCATGGCT GGTCGGTGGC GACCGATGCC
ATTTCCACCT CTATTGCCGA CAACCCGCAA GCCCTGGAAA CCCGACCCGA CTGGGTGCAC
CCGGTCGAGG CGCCGAATAC CTTCCGTGGC CGCTACCGTG GCGCAGACAG TGCCGGTGAC
TATCTACGCG ACGTCGATGC CAAGCTCGCC GACCTCGATG CCCGTGGCCG TCAGCTGGCC
GGCATGATCT GCGAACCGGT TTATGGCAAC GCCGGTGGCA TCTCGCTGCC TGCGGGTTAC
CTGAAAGAGG CGTATGCCAA GGTCCGTGCC CGCGGCGGTG TGTGCATCGC CGATGAAGTG
CAGGTGGGCT ATGGCCGCCT GGGTGAGTAC TTCTGGGGCT TCGAGGAGCA GGGGGTGGTG
CCCGACATCA TCACCATGGC CAAGGGTATG GGCAACGGCC AGCCACTGGG TGCGGTGATT
ACCCGGCGCG AGATTGCCGA GGCGCTGGAG GCGCAGGGCT ACTTCTTCTC CTCGGCTGGC
GGCAGCCCGG TGAGTTGCCG TATCGGCATG GCGGTGCTGG ACGTGATGGA CGAGGAGGGG
TTGTGGCAGA ACACCCGCGA AACCGGGCGG TATTTCAAAG CGCGCCTGCA AGCGTTGGTC
GATAAACATC CGCTTGCCGG TGCCACGCAT GGTTCGGGGT TCTACCTGGG CCTGGAGCTG
GTGCGTGACC GCCAGACGCT GGAGCCGGCC ACCGAGGAAA CCATGGTGCT GTGCGACCGC
CTGCGTGACT TGGGGATCTT CATGCAGCCG ACCGGCGACT ACCTGAACAT CCTCAAGATC
AAGCCGCCGA TGTGCACCAC GCGCGCCAGC GTGGACTACT TTGTGAACAG TGTGGACCGC
ATCCTGTCCG AAGGGTTGTA A
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| Protein sequence | MPLSTLIQRS SLPSPSLSEA QAHALLQAHY DLAGSLSRLG SQQDLNLRLD TGQERFVLKV
CHGNYAQMEL EAQHAALAYL REQGLPVPAV RPARDGQSLL ALNIDGQPLR ARLLDYIEGQ
PLTRLKHMQP RLMAELGALC ARVDKALADF DHPGLVRTLQ WDPQHAQALI EHLLPVLQDA
GQRTRLEQAT RLAAAHLAPL VDDLPSQAVH LDITDDNAVW ARDEQRQWQL QGIIDFGDLV
RTWRIADLSV TCAALLHHAE GDPLRILPAV RAYHALNPLS ETELRALWPL VLNRAAVLVL
SSEQQLAVDP GNQYTRDNIA HEWEIFDTAT AVPFALMEAA ILQAAGIEPS RPDLADCALL
LPDLAREAVT RVDLGVLSPL CEAGNWEQPG FDQRQLTAQP APACSLHGQY RLSQTHIDRP
DEPATCALGV ELHVPNGSAV QAPQAGTWQR HGDGRGCLRT AQWALWLSGL EDTPADGQAV
AKGQALGSSC GFLSVQLCLD ASIQPPLFAA PSQAAAWLAL CPSPAALLGF DCDAEPLADP
QALLARRDAS FARSQKHYYA QPPHIERGWR NYLIDMQGRS YLDMLNNVAV LGHGHPRMVA
ESARQWSLLN TNSRFHYAAI AEFSERLLKL APAGFDRVFL VNSGTEANDL AIRLAWAYSG
GRDLLSVLEA YHGWSVATDA ISTSIADNPQ ALETRPDWVH PVEAPNTFRG RYRGADSAGD
YLRDVDAKLA DLDARGRQLA GMICEPVYGN AGGISLPAGY LKEAYAKVRA RGGVCIADEV
QVGYGRLGEY FWGFEEQGVV PDIITMAKGM GNGQPLGAVI TRREIAEALE AQGYFFSSAG
GSPVSCRIGM AVLDVMDEEG LWQNTRETGR YFKARLQALV DKHPLAGATH GSGFYLGLEL
VRDRQTLEPA TEETMVLCDR LRDLGIFMQP TGDYLNILKI KPPMCTTRAS VDYFVNSVDR
ILSEGL
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