Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4942 |
Symbol | |
ID | 6113934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5459657 |
End bp | 5460763 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624756 |
Product | agmatine deiminase |
Protein accession | YP_001751787 |
Protein GI | 170724099 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.470202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000068337 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACCC TCAACTCCAC CCCCCGCGCC GACGGTTTCC ACATGCCCGC CGAATGGGCG CCGCAAAGCC AGGTGTGGAT GGTCTGGCCC GAGCGTTCGG ACAACTGGCG CCTGGGAGGC AAGCCTGCCC AGGCTGCCCA CGTCACCCTG GCCAAGGCCA TCGCCCGCTT CGAGCCGGTT ACCGTTGCTG TTTCTGCCGG CCAGTACGAA AACGCCCGTC GGCAGCTCGA CCTGCCCAAC ATCCGTGTGG TGGAAATCAG CAACGACGAC GCCTGGGTGC GTGATACCGG CCCGACCTTC GTCATCAACG ATTCGGGCGA AGTGCGCGGT GTGGATTGGG GCTTCAACGC CTGGGGCGGC TTCGACGGCG GCTTGTACGC GCCGTGGAAC CGCGATGAGG AGCTGGCAGC CAAGGTGCTG GAGATGGAGC GTTGCCAGCG CTACCAGACC GAAGGCTTCG TGCTTGAGGG CGGATCGATC CATGTGGATG GTGAGGGCAC CCTGATCACT ACCGAAGAAT GCCTGCTCAA CCGCAACCGC AACCCGCACC TGAACCGTGA GCAGATTGAA GAGATCCTGC GTGAGCACCT GGCGGTGGAG ACCATCGTCT GGCTGCCCGA TGGCCTGTAC AACGACGAAA CCGACGGCCA CGTGGACAAC TTCTGCTGTT ACGTCAGCCC AGGCGAAGTG TTACTGGCCT GGACCGATGA TTCCAACGAC CCCAACTATG CGCGCTGCCA TGCCGCCTAT GAGGTGCTGA AAAACAGCCG CGATGCCAAA GGCCGCGAGT TTGTGGTGCA CAAGATGCCC ATTCCTGGCC CGCTGTTCGC CACTGAAGAA GAGTGCGCCG GCGTCGATCA CGTGGTCGGT AGCCAGGAGC GAGACCCGTC GGTACGCCTG GCCGGGTCCT ACGTGAACTT CCTGATCGTC AACGGCGGCA TCATCGCGCC AAGCTTCAAT GACCCGGCAG ATGCCCAGGC CAGAGCCATT CTGGCCAAAG TATTCCCGGA CCACGAAGTG GTGATGATCC CCGGGCGTGA ACTGCTGCTG GGGGGTGGCA ACATTCACTG CCTGACTCAG CAGCAACCGG CGCCGGTCAA GCGCTGA
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Protein sequence | MKTLNSTPRA DGFHMPAEWA PQSQVWMVWP ERSDNWRLGG KPAQAAHVTL AKAIARFEPV TVAVSAGQYE NARRQLDLPN IRVVEISNDD AWVRDTGPTF VINDSGEVRG VDWGFNAWGG FDGGLYAPWN RDEELAAKVL EMERCQRYQT EGFVLEGGSI HVDGEGTLIT TEECLLNRNR NPHLNREQIE EILREHLAVE TIVWLPDGLY NDETDGHVDN FCCYVSPGEV LLAWTDDSND PNYARCHAAY EVLKNSRDAK GREFVVHKMP IPGPLFATEE ECAGVDHVVG SQERDPSVRL AGSYVNFLIV NGGIIAPSFN DPADAQARAI LAKVFPDHEV VMIPGRELLL GGGNIHCLTQ QQPAPVKR
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