| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4935 |
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| Symbol | |
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| ID | 6113927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5448592 |
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| End bp | 5449911 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624749 |
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| Product | integrase family protein |
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| Protein accession | YP_001751780 |
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| Protein GI | 170724092 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.020057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000122122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCGCA CAACGGCTCC CCTTACCGAC AACGCCTGCC GCACTGCAAA GGCTCGCGAA
CGTGAGTACA AGCTTTTTGA CGGCGATGGC CTTTACCTGC TCGTGAAACC CAACGGTCGC
AAAGGCTGGC GGCTCAGGTA TGTGAAGCCC GATGGTCGCG AGGGCCTGAC CTCACTCGGC
AATTACCCGG TGGTCGGGCT GGCTGACGCT CGCCACAAGC GCTTCGAGCT CAAACAGCAG
CTCGCCAACG GCATTGACCC TATCCAGTCC AAGCAGCAGG CCAAGGTGCA AGCCGTGATC
AATGGCCGAA CCTTCGAAAG CGTTGCGCTC GATTGGTATG CCGGGATGGT GCCGAAGTGG
GCGCCGGGCC ACGCTAAGAC TGTGCTCAGC CGGTTGAAGA CTCACGTATT CCCTTTGTTA
GGTGCCAGGG CAATCGTTGA GTTGGATACC CACGACCTCA TGCAGCCACT GGAGGCTGTG
ACGAAGCGCG GCACCATCGA CGTGGCGCTG AGGATCAAGA ACTACCTGCA AAGCATCATG
CGCGAAGCCA AACGGCTGCG ACTGATCACG GCGAACCCGG CTCACGATCT CGATGGCTCG
ATCAAAACGC CACGGGTTAC ACATCGACCC GCACTACCCT TATCGCGGTT GCCTGAGCTA
CAGGCGCGTA TCGACGGCTA CAAAGGTCGC CCACTCACGC GCCTCACGGT GATGCTATCG
CTGCACGTGT TCGTGCGCTC CAGTGAACTG CGCTTCGCCC GTTGGAACGA GTTTGACCTC
AAGCGTGGCA TCTGGGAGAT CCCCGACACC CGCCCGGCGC TGGACGGAGT ACCCTTTTCC
ACAAGGGGTA CAAAAATGGC CGGGGATATC CACGTTGTAC CCTTATCGCC GCAGGCAGTG
GCCTTGCTTG AGCAGATCCA CGCGATCACC GGCAAGTTCG AGCTGGTGTT CGCGGGGGAT
GCCAAACCGT GGAAGCCGAT GTCCGAGAAC ACGGTGAACG CCGCGCTAAG GACGATGGGC
TATGACACCA AGGTGGATAT CTGCGGCCAC GGGTTCCGAG CCATGGCGTG CAGTGCGCTG
GTCGAGTCCG GGCTGTGGTC GGAGACGGCT ATCGAGCGGC AGATGAGCCA CAAGGAACGC
AACAACGTGC GCGCCGCCTA CACCCACAAG GCCGAGTTCC TCGAAGAGCG CCGGATGATC
ATGACCTGGT GGAGCCGGTT TCTAGAGGCG AACCGCGAGG ACCATGTGAC GCCGCATGAG
TTTGCCAGGC AGACGGGCGA AAACGTCACG CGGCTTCGCA GTGCCAAGCG GACCGAGTAA
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| Protein sequence | MARTTAPLTD NACRTAKARE REYKLFDGDG LYLLVKPNGR KGWRLRYVKP DGREGLTSLG
NYPVVGLADA RHKRFELKQQ LANGIDPIQS KQQAKVQAVI NGRTFESVAL DWYAGMVPKW
APGHAKTVLS RLKTHVFPLL GARAIVELDT HDLMQPLEAV TKRGTIDVAL RIKNYLQSIM
REAKRLRLIT ANPAHDLDGS IKTPRVTHRP ALPLSRLPEL QARIDGYKGR PLTRLTVMLS
LHVFVRSSEL RFARWNEFDL KRGIWEIPDT RPALDGVPFS TRGTKMAGDI HVVPLSPQAV
ALLEQIHAIT GKFELVFAGD AKPWKPMSEN TVNAALRTMG YDTKVDICGH GFRAMACSAL
VESGLWSETA IERQMSHKER NNVRAAYTHK AEFLEERRMI MTWWSRFLEA NREDHVTPHE
FARQTGENVT RLRSAKRTE
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