| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4927 |
|---|
| Symbol | |
|---|
| ID | 6113918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5442360 |
|---|
| End bp | 5443133 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641624740 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001751772 |
|---|
| Protein GI | 170724084 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000000746315 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGG CCACGCCCGC GCTGGAAATC CGCAACCTGC ACAAACGCTA CGGCGACCAG
GAAATTCTCA AGGGCATTTC GCTGACCGCG CGTGACGGTG ACGTGATCTC CATTCTGGGA
TCGTCCGGCT CCGGCAAGTC CACCCTGCTG CGCTGCATCA ACCTGTTGGA AAACCCGCAC
CAGGGCGAAA TCCTGGTTGC CGGTGAGGCT CTCAAGCTCA AGGCCGCCAA GAACGGCGAC
CTGATCGCTG CCGACAACCG CCAGATCAAT CGCCTGCGCA GCGAGATCGG CTTCGTCTTC
CAGAATTTCA ACCTGTGGCC GCACATGTCG ATCCTCGACA ACATCATCGA GGCGCCACGC
CGCGTGCTCG GCCAGAGCAA GGCCGAAGCC ACCGAAGCCG CCGAAGCGCT GCTGAACAAG
GTCGGCATCT ACGACAAGCG CCACAGCTAC CCCGCCCAGC TTTCCGGTGG CCAGCAGCAG
CGTGCTGCCA TCGCCCGCAC CCTGGCCATG CGGCCTAAAG TCATTCTGTT CGATGAGCCA
ACCTCGGCGC TCGATCCGGA AATGGTCCAG GAAGTGCTTA ACGTTATCCG CGCACTGGCC
GAAGAAGGCC GTACCATGCT GCTGGTGACG CACGAGATGA ACTTTGCCCG CCAGGTGTCC
AGTGAAGTGG TTTTCCTGCA CCAGGGCCTG GTTGAAGAGC AAGGATCGCC GCAGCAGGTC
TTCGAAAACC CGACCTCGGC GCGTTGCAAG CAATTCATGT CCAGCCACCG CTAA
|
|---|
| Protein sequence | MAQATPALEI RNLHKRYGDQ EILKGISLTA RDGDVISILG SSGSGKSTLL RCINLLENPH
QGEILVAGEA LKLKAAKNGD LIAADNRQIN RLRSEIGFVF QNFNLWPHMS ILDNIIEAPR
RVLGQSKAEA TEAAEALLNK VGIYDKRHSY PAQLSGGQQQ RAAIARTLAM RPKVILFDEP
TSALDPEMVQ EVLNVIRALA EEGRTMLLVT HEMNFARQVS SEVVFLHQGL VEEQGSPQQV
FENPTSARCK QFMSSHR
|
|---|
| |