| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4921 |
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| Symbol | |
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| ID | 6113911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5434740 |
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| End bp | 5436983 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624733 |
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| Product | AsmA family protein |
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| Protein accession | YP_001751766 |
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| Protein GI | 170724078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00010257 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCGT TCGGCAAACT CCTGGGACTG GGGCTTCTCG GGTTGCTGCT GATCATCGTG
GCGCTGGGCT TCGCCCTGAC CCACCTCTTC GATCCCAACG ACTATAAAGA CGAGATCCGC
CAGTTGGCGC GCGACAAAGC CCACGTCGAG CTGACCCTCA ATGGCGACAT CGGCTGGAGC
CTGTTCCCGT GGCTGGGCCT GGAGCTTCAC GAAGCCAGCA TCGCCACCCT GAACAAGCCC
AAGGAACCGT TCGCCGACCT GCAGATGCTT GGCCTGTCGG TACGCGTGCT GCCCTTGCTG
CGCCGTGAAG TGCAGATGAG CGATGTGCGC GTCGAAGGCC TGAACCTGAC CCTGAACCGT
GATGAACAGG GCCATGGCAA CTGGGAAGAC ATCGGCAAGC CGCTGCCTGC GCAAACCGAC
CCAACTGCCA GTGCACCTGC GCCTGCCGAA CAGCCCAGCG CACCTGCAGA GGGCAGCAGC
GAACGTTCGG TCAAGCTCGA CATCGACAGC CTGACCGTGA ACAACGCCCG TGTGCACTAC
ACCGATGCCA AGACCGGCCA GAGCTACACC GCCGAAAGCA TCCAGCTGAG CACCGGCCCG
GTCCACGAGG GCGCGAACAT CCCGCTCAAG GCCAGCGCCT TCCTCAGCGC CAGCCAGCCG
AACATGAAGG CACGCACCGA ACTTGCCGGC GAACTGCGCT TTGACCGCAA GCTCAAGCGC
TACAACTTCG AGGACATGCG CCTGTCCGGC GAAACCTCGG GCGAGCCTCT GGCCGGCAAA
ACCATGACCT TCGCGGCCCA AGGTCAGCTG TTGGTCGACA TGGCAGCCAA CGTCGCCTCC
TGGAACGGCC TGAAAATCTC GGCCAACCAG CTGCGCGCCC TTGGCGAGCT GAACCTGCGC
GACCTGGACA AGACGCCGCA GCTCAGCGGT GGGCTGTCCA TCGCCCAGTT CGACCTGCGC
ACCTTCCTCG ATGGCGTCGG CCATCCGCTG CCGGCCACCA ACGACCCCGC CGCCTTCAAC
AAGCTGGAGC TGGTCAGCCG CCTGCAGGGC ACGCCAAGCA GCCTGGCCCT GGAAGACCTC
GCCGTAAAAC TCGACGACAG CACCTTCAGC GGCCGCGTTG CCGTCGAGGA CTTTGCCAAG
CAAGCCCTGC GCGTGCAGCT CAAGGCCGAC AAGTTCGACG CCGACCGCTA CATGCCGGCC
AAGAGCGAAG CAGCCAAGGG TGCCACCGCA GCGCGCCAGA ACGAGGTCAA GCAACAGGAA
GCCAGCGCCA TCGCCGGTGC CGGCAGTTCG CCGCTGCCAA ACGCGCCCAC CCAGGTAGCC
TGGAGCAACG ACAAGCTGCT GCCGGTGGAC CGTCTTCGCA CGCTCGACCT GCAGGCCGAC
CTGGCCTTCG GCTCACTGAC CCTGGACAAG CTGCCGATCA GCGACGCGCA GTTGCAAGCG
AACGGCCAGG GCGGCCTGGT CACCCTGCAG ACCCTGCGCG GTGGCCTCTA CAACGGCAGC
TTTGAAGCCA AGGGCACCGT AGATGTGCGC CCAGCCGTGC CGCAGATCGG CGTCAATACC
AAGATCAACC GGGTGCCGGT GGAGCACTTC ATCAAGGCTG AAGACAAAGA CCAGGCACCG
CCGGTCAAAG GCCTGCTGAC CCTGACCAGC GACCTGACAG CCACCGGTAA CAGCCAGAAG
GCACTGGTGG ACACCCTCAA CGGCAACGCA AACTTCACCA TCAACGACGG CGTGCTGGTC
AACGCCAACC TGGAACAGCA GCTCTGCCAG GCCATCGCCA CCCTCAACCG CAAGACGCTC
AGCGGCGAAC CACGCGGCAA GGACACGCCG TTCGAAGAAC TGCGCGGCAG CCTGGTGGTG
CGCAACGGCG TGGCCAGCAA TCCGGACCTC AAGGCGCGCA TCCCAGGCCT CACCGTCAAC
GGCCACGGCG ACCTCGACCT GCGCGTGCTG GGCATGGACT ACAACGTCGG CGTAATCGTC
GAAGGTGACC AGCGTGCCAT GCCCGACCCG GCCTGCCAGG TCAACGAGCG TTACGTCGGC
GTCGAACTGC CGCTGCGTTG CCGTGGCCCG CTGGAGCTTG GCGCCAAGGC CTGCCGCCTG
GACCAGGACG GCCTGGGCAA GGTTGCCGCC AAACTGGCCG GCAACCGCCT CAAAGACAAG
ATCGATGAAA AGCTCGATGA AAAACTCGGA GACAAAGTGA GCCCAGAATT GAAAGACGCG
CTCAAGGGGC TGTTCAAGCG ATGA
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| Protein sequence | MKAFGKLLGL GLLGLLLIIV ALGFALTHLF DPNDYKDEIR QLARDKAHVE LTLNGDIGWS
LFPWLGLELH EASIATLNKP KEPFADLQML GLSVRVLPLL RREVQMSDVR VEGLNLTLNR
DEQGHGNWED IGKPLPAQTD PTASAPAPAE QPSAPAEGSS ERSVKLDIDS LTVNNARVHY
TDAKTGQSYT AESIQLSTGP VHEGANIPLK ASAFLSASQP NMKARTELAG ELRFDRKLKR
YNFEDMRLSG ETSGEPLAGK TMTFAAQGQL LVDMAANVAS WNGLKISANQ LRALGELNLR
DLDKTPQLSG GLSIAQFDLR TFLDGVGHPL PATNDPAAFN KLELVSRLQG TPSSLALEDL
AVKLDDSTFS GRVAVEDFAK QALRVQLKAD KFDADRYMPA KSEAAKGATA ARQNEVKQQE
ASAIAGAGSS PLPNAPTQVA WSNDKLLPVD RLRTLDLQAD LAFGSLTLDK LPISDAQLQA
NGQGGLVTLQ TLRGGLYNGS FEAKGTVDVR PAVPQIGVNT KINRVPVEHF IKAEDKDQAP
PVKGLLTLTS DLTATGNSQK ALVDTLNGNA NFTINDGVLV NANLEQQLCQ AIATLNRKTL
SGEPRGKDTP FEELRGSLVV RNGVASNPDL KARIPGLTVN GHGDLDLRVL GMDYNVGVIV
EGDQRAMPDP ACQVNERYVG VELPLRCRGP LELGAKACRL DQDGLGKVAA KLAGNRLKDK
IDEKLDEKLG DKVSPELKDA LKGLFKR
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