| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4916 |
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| Symbol | |
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| ID | 6113906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5430135 |
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| End bp | 5430872 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624728 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001751761 |
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| Protein GI | 170724073 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00168628 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGATTA TCCCCGCTAT CGATCTGAAG GACGGTGCCT GCGTGCGCCT GCGCCAGGGC
CGCATGGAAG ACTCCACGGT ATTTTCCGAC GACCCGGTGA GCATGGCCGC CAAGTGGGTT
GAGGGTGGTT GCCGTCGCCT GCACCTGGTC GACCTCAACG GCGCCTTCGA AGGCCAGCCG
GTCAACGGTG AGGTGGTCAC TGCCATCGCC AAGCGTTACC CGAACCTGCC GATCCAGATC
GGCGGCGGCA TCCGTTCGCT GGAAACCATT GAGCACTACG TCAAGGCTGG CGTCAGCTAC
GTGATCATTG GCACCAAGGC GGTCAAGCAG CCTGAGTTCG TCGCCGAAGC CTGCAAAGCC
TTCCCCGGCA AGGTCATCGT CGGCCTGGAC GCCAAGGACG GTTTCGTCGC CACCGACGGC
TGGGCTGAAG TGAGCTCGGT GCAGGTCATC GACCTGGCCA AGCGCTTCGA GGCCGATGGC
GTCTCGGCGA TCGTCTACAC CGACATCGCC AAGGACGGCA TGATGCAGGG CTGCAACGTG
CCATTCACCG CGGCGCTGGC AGCGGCCACC TCGATCCCGG TGATCGCCTC GGGCGGCATC
CACAACCTGG GTGACATCAA GACCCTGCTG GACGCCAAGG CCCCAGGCAT CGTCGGTGCA
ATCACTGGCC GTGCCATCTA CGAAGGCACC CTCGATGTCG CCGAGGCCCA GGCCTTCTGC
GACAACTATA AAGGCTGA
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| Protein sequence | MLIIPAIDLK DGACVRLRQG RMEDSTVFSD DPVSMAAKWV EGGCRRLHLV DLNGAFEGQP
VNGEVVTAIA KRYPNLPIQI GGGIRSLETI EHYVKAGVSY VIIGTKAVKQ PEFVAEACKA
FPGKVIVGLD AKDGFVATDG WAEVSSVQVI DLAKRFEADG VSAIVYTDIA KDGMMQGCNV
PFTAALAAAT SIPVIASGGI HNLGDIKTLL DAKAPGIVGA ITGRAIYEGT LDVAEAQAFC
DNYKG
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