| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4913 |
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| Symbol | |
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| ID | 6113903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5427219 |
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| End bp | 5428064 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624725 |
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| Product | choline ABC transporter, permease protein |
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| Protein accession | YP_001751758 |
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| Protein GI | 170724070 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00412098 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTATCG ATCAGAAAAT ACCCCTGGGT CAGTACATCG CGTCATTCGT CGAATGGCTG
ACCCAGAATG GCGCCGATTA CTTCGACGCC ATCGCCCAAG GCCTGGAATT CATGATCCAT
GGCGTCACCA GCACCCTGAC CTGGTTCAAC CCGTTCGTCC TCATCGCCCT GTTCGCCGCC
CTCGCGCACT TGATCCAGCG CAAATGGGCA CTGACTGTGT TCGTCGCCCT CTCCTTTCTG
CTGATCCTCA ACCTGGGGTA CTGGCAGGAG ACCATGGAAA CCCTGGCGCA AGTCACCTTT
GCCACCGTGG TCTGTGTGGC CATCGGCGTG CCGCTGGGTA TCGTCGCCGC GCACAAACCG
ATGTTCTACA CCGCGATGCG CCCGGTGCTC GACCTGATGC AGACGGTACC GACCTTCGTT
TACCTGATCC CTACCCTGAC ACTGTTCGGC CTGGGCGTGG TGCCTGGGCT GATCTCCACG
GTGGTGTTCG CCATCGCCGC ACCGATTCGC CTGACCTACC TGGGCATCTG CGACGTGCCG
CAGGAGCTGC TGGACGCCGG CAAGGCCTTC GGCTGCTCAC GACGCCAGTT GCTGACCCGC
ATCGAACTGC CCCACGCGAT GCCCAGCATC GCCGCCGGTG TTACCCAGTG CATCATGCTG
TCGCTGTCGA TGGTGGTGAT CGCGGCCCTG GTGGGCGCCG ACGGCCTGGG CAAACCCGTG
GTCAACGCAC TGAACACCGC TGATATTTCC CTGGGCTTTG AAGCGGGCCT GGCGATCGTA
CTGCTGGCCA TCATGCTCGA CCGTATCTGC AAGCAACCGG AAGTCACGGT AAGGGGTGAA
GCATGA
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| Protein sequence | MLIDQKIPLG QYIASFVEWL TQNGADYFDA IAQGLEFMIH GVTSTLTWFN PFVLIALFAA
LAHLIQRKWA LTVFVALSFL LILNLGYWQE TMETLAQVTF ATVVCVAIGV PLGIVAAHKP
MFYTAMRPVL DLMQTVPTFV YLIPTLTLFG LGVVPGLIST VVFAIAAPIR LTYLGICDVP
QELLDAGKAF GCSRRQLLTR IELPHAMPSI AAGVTQCIML SLSMVVIAAL VGADGLGKPV
VNALNTADIS LGFEAGLAIV LLAIMLDRIC KQPEVTVRGE A
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