| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4910 |
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| Symbol | |
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| ID | 6113900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5422872 |
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| End bp | 5423978 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624722 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001751755 |
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| Protein GI | 170724067 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00942326 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGTCGT ACACCTCCGG GAATCCAACC CAGAACCGCA CAGCACCCCA GTCCATCGGG
TTTCTCCTAC TGGACAACTT CACCCTGATT TCCCTGGCAT CGGCCGTCGA GCCGCTGCGC
ATGGCCAACC AGCTTTCGGG CCGTGAGCTG TATCGCTGGC ACACGCTGAC CGTCGATGGC
GGCCAGGTCT GGGCCAGCGA TGGCTTGCAG ATCACCCCGG ACGCCGCCAT CGCCAACGCT
CCTCCCATCG ACACCGTGAT CGTCTGCGGT GGCGTCGGTA TCCAGCGTTC GGTCACCCGT
GAGCATGTCA CCTGGCTGCA GGCCCAGGCC CGTCAGTCGC GCCGTTTGGG CGCTGTGTGT
ACCGGCAGCT GGGCGCTGGC CTGTGCCGGC TTGCTCGATG GCTTCGACTG CAGCGTGCAC
TGGGAATGCC TGGCGGCGAT GCAGGAGGCG TTTCCGCGGG CAAACATGAG CACTCGCCTG
TTCACCCTCG ACCGTAACCG TTTCACCAGC TCTGGCGGCA CTGCGCCGCT GGACATGATG
CTGCACCTGA TCAGCCGCGA TCATGGCCGT GAACTGTCTG CGGCGATCTC TGAGATGTTC
GTCTACGAGC GCATTCGCAA CGAGCAGGAC CACCAGCGCG TGCCGCTCAA GCACATGCTG
GGCACCAACC AGCCGAAGCT GCAGGAAATC GTCGCGCTGA TGGAGGCCAA CCTGGAAGAG
CCGATCGACC TCGACGAACT GGCCGTGTAC GTGGCCGTGT CGCGTCGCCA GCTTGAGCGC
CTGTTCCAGA AGTACCTGCA TTGTTCGCCG TCGCGCTATT ACCTCAAGCT GCGTCTGATT
CGCGCGCGGC AGCTGCTGAA GCAGACGCCG ATGTCGATCA TCGAAGTGGC CTCGGTGTGC
GGCTTCGTGT CCACCCCGCA CTTCTCCAAG TGCTACCGCG AGTACTTCGG CATACCGCCG
CGTGATGAAC GAGTAGGTTC AAACACCGCA CAGCAAGTGG CAATGATGCC TATTCCGCAA
GCCATGACCC TGTCCCCGCA CAGTGGGCCG ATGGCTGCAC TGAGCCAGGC GCGTAACGAG
TCGACCTTTG CCAGTGTGAG GCTCTGA
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| Protein sequence | MTSYTSGNPT QNRTAPQSIG FLLLDNFTLI SLASAVEPLR MANQLSGREL YRWHTLTVDG
GQVWASDGLQ ITPDAAIANA PPIDTVIVCG GVGIQRSVTR EHVTWLQAQA RQSRRLGAVC
TGSWALACAG LLDGFDCSVH WECLAAMQEA FPRANMSTRL FTLDRNRFTS SGGTAPLDMM
LHLISRDHGR ELSAAISEMF VYERIRNEQD HQRVPLKHML GTNQPKLQEI VALMEANLEE
PIDLDELAVY VAVSRRQLER LFQKYLHCSP SRYYLKLRLI RARQLLKQTP MSIIEVASVC
GFVSTPHFSK CYREYFGIPP RDERVGSNTA QQVAMMPIPQ AMTLSPHSGP MAALSQARNE
STFASVRL
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