| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4885 |
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| Symbol | |
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| ID | 6113875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5394623 |
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| End bp | 5395876 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624697 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001751730 |
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| Protein GI | 170724042 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.994809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.551008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGCA AGCAAGACCA GATCCAGGGT TACGACGACG CACTGCTGGC GGCGATGAAT
GCCGAAGAAC AGCGCCAGGA AGATCACATC GAGCTGATCG CCTCGGAGAA CTACACCAGC
AAGCGCGTCA TGCAGGCCCA AGGCAGCGGC CTGACCAACA AGTACGCCGA AGGCTACCCA
GGCAAGCGCT ACTACGGTGG CTGCGAGCAC GTCGACAAAG TCGAGGCGCT GGCCATCGAG
CGCGCCAAGC AGCTGTTCGG TGCCGACTAC GCCAACGTTC AGCCACATTC CGGCTCTTCG
GCCAACAGCG CCGTGTATCT GGCTCTGCTG CAGGCCGGTG ACACCATCCT GGGCATGAGC
CTGGCCCACG GCGGCCACCT GACCCACGGC GCCAAAGTGT CGTCCTCGGG CAAGCTGTAC
AACGCGGTGC AATACGGCAT CGACACCAAC ACCGGTCTGA TCGACTACGA CGAAGTCGAG
CGCCTGGCCG TCGAGCACAA GCCGAAGATG ATCGTTGCCG GCTTCTCGGC CTATTCCAAG
ACCCTCGACT TCCCGCGTTT TCGCGCCATC GCAGACAAGG TCGGTGCGCT GTTGTTCGTC
GACATGGCCC ACGTTGCCGG CCTGGTTGCC GCTGGCCTGT ACCCGAACCC GATCCCGTTC
GCCGACGTGG TGACCACCAC TACCCACAAG ACCCTGCGCG GCCCACGTGG CGGCCTGATC
CTGGCCAAGT CGAACGAAGA GATCGAGAAA AAGCTCAACG CCGCCGTCTT CCCCGGCGCC
CAGGGCGGCC CGCTGATGCA CGTCATCGCA GCCAAGGCTG TGTGCTTCAA GGAAGCTCAG
GAGCCTGAGT TCAAGAGCTA CCAGAAGCAG GTCATCGAGA ACGCCCAGGC CATGGCCCAA
GTGTTCATCG ACCGCGGCTA CGACGTGGTC TCCGGCGGTA CCGACAACCA CCTGTTCCTG
GTCAGCCTGA TCCGCCAGGG CCTGACCGGC AAAGATGCCG ACGCTGCCTT GGGCCGCGCG
CACATCACCG TCAACAAAAA CGCTGTGCCG AACGACCCGC AGTCGCCGTT CGTCACTTCC
GGCCTGCGCA TCGGCACCCC GGCTGTCACC ACACGCGGCT TCAAGGTCGC CCAGTGTGTG
GCCCTGGCCG GCTGGATCTG CGACATCCTC GATAACCTCG GTGACGCTGA TGTCGAAGCC
GATGTGGCGA AGAACGTCGC GGCTCTGTGC ACAGACTTCC CTGTTTACCG CTGA
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| Protein sequence | MFSKQDQIQG YDDALLAAMN AEEQRQEDHI ELIASENYTS KRVMQAQGSG LTNKYAEGYP
GKRYYGGCEH VDKVEALAIE RAKQLFGADY ANVQPHSGSS ANSAVYLALL QAGDTILGMS
LAHGGHLTHG AKVSSSGKLY NAVQYGIDTN TGLIDYDEVE RLAVEHKPKM IVAGFSAYSK
TLDFPRFRAI ADKVGALLFV DMAHVAGLVA AGLYPNPIPF ADVVTTTTHK TLRGPRGGLI
LAKSNEEIEK KLNAAVFPGA QGGPLMHVIA AKAVCFKEAQ EPEFKSYQKQ VIENAQAMAQ
VFIDRGYDVV SGGTDNHLFL VSLIRQGLTG KDADAALGRA HITVNKNAVP NDPQSPFVTS
GLRIGTPAVT TRGFKVAQCV ALAGWICDIL DNLGDADVEA DVAKNVAALC TDFPVYR
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