| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4884 |
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| Symbol | |
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| ID | 6113874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5393357 |
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| End bp | 5394607 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624696 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_001751729 |
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| Protein GI | 170724041 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.66483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCT ACTCGGGCTT CGGCCTCTTC AAACACTCCC TCAGCCACCA CGAGAACTGG
CAGCGCATGT GGCGCACGCC GACCCCTAAA AAGGTCTACG ACGTGGTCAT CGTCGGCGGT
GGCGGCCATG GCCTGGCCAC CGCCTACTAC CTGGCCAAGG AACACGGCAT CACCAATGTC
GCGGTGGTCG AGAAAGGTTA CCTGGGCGGC GGCAACACCG CCCGTAACAC CACCATCGTG
CGTTCCAACT ACCTGTGGGA CGAATCGGCC CAGCTGTACG AGCATGCCAT GAAGCTGTGG
GAGGGCCTGT CCCAGGACAT CAACTACAAC GTGATGTTCT CCCAGCGCGG GGTCTACAAC
CTGTGCCATA CCCTGCAGGA CATTCGTGAT TCCGAGCGCC GCGTCAGCGC CAACCGCCTC
AACGGCGTCG ATGGCGAACT GCTCAACACC GCCCAGGTCG CGGCCGAAAT CCCGTACCTG
GACTGCTCGA AGAACACCCG TTACCCGATC CTCGGCGCTA CCGTTCAGCG CCGTGGTGGC
GTCGCCCGTC ACGACGCCGT GGCCTGGGGT TACGCCCGTG CCGCCGACGC CCTGGGCGTG
GACCTGATCC AGCAGACCGA AGTGATCGGT TTCCGCAAGG AAAACGGTGC AGTGATCGGT
GTGGAAACCA ACAAAGGTTT CATCGGCGCC AAGCGCGTCG GTGTGGTCAC TGCCGGTAAT
TCCGGGCACA TGGCCAGGCT GGCCGGCTTC CGCCTGCCGC TGGAGTCGCA CCCGCTGCAA
GCACTGGTAT CCGAGCCGAT CAAGCCGATC ATCGACAGCG TGATCATGTC CAACGCCGTG
CACGGCTACA TCAGCCAGTC CGACAAGGGC GACCTGGTGA TCGGCGCCGG TATCGACGGC
TGGGTCGGCT ACGGCCAGCG CGGTTCGTAC CCGGTTATCG AGCACACCCT GCAGGCCATC
GTCGAGATGT TCCCCAACCT CTCGCGCGTG CGTATGAACC GCCAGTGGGG CGGCATCGTC
GACACCTCGC CGGACGCCTG CCCGATCATT TCCAAGACTC CGGTCAAGAA CATGTTCTTC
AACTGCGGCT GGGGCACCGG CGGCTTCAAG GCGACCCCGG GCTCGGGCAA CGTCTTTGCC
GCAAGCCTGG CCAAAGGCGA GATGCACCCG CTGGCTGCGC CGTTCTCCAT GGACCGTTTC
TACAACGGCG CACTGATCGA CGAACACGGC GCCGCCGCCG TCGCCCACTA A
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| Protein sequence | MQRYSGFGLF KHSLSHHENW QRMWRTPTPK KVYDVVIVGG GGHGLATAYY LAKEHGITNV
AVVEKGYLGG GNTARNTTIV RSNYLWDESA QLYEHAMKLW EGLSQDINYN VMFSQRGVYN
LCHTLQDIRD SERRVSANRL NGVDGELLNT AQVAAEIPYL DCSKNTRYPI LGATVQRRGG
VARHDAVAWG YARAADALGV DLIQQTEVIG FRKENGAVIG VETNKGFIGA KRVGVVTAGN
SGHMARLAGF RLPLESHPLQ ALVSEPIKPI IDSVIMSNAV HGYISQSDKG DLVIGAGIDG
WVGYGQRGSY PVIEHTLQAI VEMFPNLSRV RMNRQWGGIV DTSPDACPII SKTPVKNMFF
NCGWGTGGFK ATPGSGNVFA ASLAKGEMHP LAAPFSMDRF YNGALIDEHG AAAVAH
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