| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4881 |
|---|
| Symbol | |
|---|
| ID | 6113871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5389181 |
|---|
| End bp | 5389813 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641624693 |
|---|
| Product | sarcosine oxidase gamma subunit family protein |
|---|
| Protein accession | YP_001751726 |
|---|
| Protein GI | 170724038 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4583] Sarcosine oxidase gamma subunit |
|---|
| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.528433 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTA TCAACGTCTT CCAGCAAAAC CCCGGCGCCG ACGCCAAGGC TCAGTCGCCG
CTGCATCACG CCGACCTGGC CAGCCTGGTT GGCAAGGGCC GCAAGAACGC AGGCGTGACC
CTGCGTGAAA AGAAATTCCT CGGCCACCTG ACCCTTCGCG GCGACGGCCA CGACCCGGAA
TTCGCCGCAG GCGTGCACAA GGCCCTGGGC CTGGAGCTGC CAGTGGCCCT GACCGTGGTC
GCCAATAGTG AGATGTCGTT GCAGTGGCTC GGCCCCGATG AGTGGCTGCT GATCGTCCCC
GGCGGCCAGG AGTTCGCCGT CGAGCAAAAA CTGCGCGCGG CCCTTGAAGG CCAGCACATC
CAGGTGGTCA ACGTCAGCGG CGGGCAAAGC CTGCTGGAGC TGCGTGGCCC GCACGTGCGC
GAAGTGCTGA TGAAGTCCAC CAGCTATGAT GTTCACCCGA ACAACTTCCC GGTGGGCAAG
GCGGTGGGTA CCGTGTTCGC CAAGTCGCAA CTGGTGATCC GCCGCACGGC CGAGGACACC
TGGGAGCTGG TGATTCGCCG CAGCTTCGCC GATTACTGGT GGCTGTGGCT GCAGGACGCT
TCTGCCGAAT ACGGCCTGAG CATCGAAGCC TAA
|
|---|
| Protein sequence | MSAINVFQQN PGADAKAQSP LHHADLASLV GKGRKNAGVT LREKKFLGHL TLRGDGHDPE
FAAGVHKALG LELPVALTVV ANSEMSLQWL GPDEWLLIVP GGQEFAVEQK LRAALEGQHI
QVVNVSGGQS LLELRGPHVR EVLMKSTSYD VHPNNFPVGK AVGTVFAKSQ LVIRRTAEDT
WELVIRRSFA DYWWLWLQDA SAEYGLSIEA
|
|---|
| |