| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4879 |
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| Symbol | |
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| ID | 6113869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5386841 |
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| End bp | 5388040 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624691 |
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| Product | formaldehyde dehydrogenase, glutathione-independent |
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| Protein accession | YP_001751724 |
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| Protein GI | 170724036 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.734833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGCA ATCGTGGAGT GGTGTACCTG GGCGCTGGCA AGGTCGAGGT GCAGAAAATC
GACTACCCGA AGATGCAGGA CCCGCGCGGC AAGAAGATCG AGCACGGCGT CATCCTCAAG
GTGGTCTCCA CCAACATCTG CGGCTCCGAC CAGCACATGG TCCGCGGCCG CACCACTGCC
CAGGTCGGCC TGGTCCTGGG CCACGAAATC ACCGGTGAAA TCGTCGAGAT GGGGCGTGAC
GTCGAACGCC TGAAAATCGG TGACCTGGTG TCGGTGCCGT TCAACGTCGC CTGCGGCCGC
TGCCGCTCCT GCAAAGAGAT GCACACCGGT GTCTGCCTCA CCGTCAACCC GGCCCGCGCC
GGCGGTGCCT ACGGTTACGT TGACATGGGC GACTGGACCG GCGGCCAGGC TGAATACGTG
CTGGTACCGT ATGCCGACTT CAACCTGCTG AAACTGCCGG ATCGCGACAA GGCCATGGAG
AAGATCCGTG ACCTGACCTG CCTGTCCGAC ATCCTGCCAA CCGGCTACCA CGGTGCCGTG
ACTGCTGGCG TAGGCCCAGG CAGTACCGTT TACGTCGCAG GTGCTGGCCC GGTCGGCCTG
GCCGCGGCTG CCTCGGCCCG CCTGCTGGGC GCTGCCTGCG TCATCGTCGG CGATCTGAAC
CCGGCCCGCC TGGCCCACGC CAAGTCCCAG GGCTTTGAAG TGGTCGACCT GTCCAAGGAC
ACCCCGCTGC ACGAACAGAT CATCGACATC CTCGGCGAGC CGGAAGTGGA CTGTGCAGTT
GATGCGGTGG GCTTCGAGGC ACGTGGTCAT GGGCATGAAG GCGCCAAACA TGAAGCACCG
GCCACTGTGC TGAACTCGCT GATGCAGGTC ACTCGCGTTG CCGGCAACAT CGGTATCCCG
GGCCTGTACG TGACCGAAGA CCCAGGCGCG GTGGATGCTG CCGCCAAGAT CGGCGCGCTG
AGCATCCGCT TTGGCCTGGG ATGGGCAAAA TCGCACAGCT TCCACACCGG CCAGACCCCG
ACCATGAAAT ACAACCGCCA ATTGATGCAG GCGATCATGT GGGACCGGAT CAACATCGCT
GAAGTTGTTG GTGTGCAGGT CATCAGCCTG GATCAGGCGC CAGAAGGGTA CGGCGAGTTC
GATGCCGGGG TGCCGAAGAA GTTTGTGATT GATCCGCACA AGACGTTTAG CGCGGCGTAA
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| Protein sequence | MSGNRGVVYL GAGKVEVQKI DYPKMQDPRG KKIEHGVILK VVSTNICGSD QHMVRGRTTA
QVGLVLGHEI TGEIVEMGRD VERLKIGDLV SVPFNVACGR CRSCKEMHTG VCLTVNPARA
GGAYGYVDMG DWTGGQAEYV LVPYADFNLL KLPDRDKAME KIRDLTCLSD ILPTGYHGAV
TAGVGPGSTV YVAGAGPVGL AAAASARLLG AACVIVGDLN PARLAHAKSQ GFEVVDLSKD
TPLHEQIIDI LGEPEVDCAV DAVGFEARGH GHEGAKHEAP ATVLNSLMQV TRVAGNIGIP
GLYVTEDPGA VDAAAKIGAL SIRFGLGWAK SHSFHTGQTP TMKYNRQLMQ AIMWDRINIA
EVVGVQVISL DQAPEGYGEF DAGVPKKFVI DPHKTFSAA
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