Gene PputW619_4852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4852 
Symbol 
ID6113842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5351846 
End bp5354278 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content61% 
IMG OID641624664 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001751697 
Protein GI170724009 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4774] Outer membrane receptor for monomeric catechols 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTG CCGTTGATCG TATCCTGCGC CCCAGCCTGA TGGCCTTGGC CATCGCCCTG 
GCTGCCCCGT TGGCCAGCAC TGCCCTGTTC GCCGCCGAGC AGTCCGCACA GCGCGCCTAC
GACCTGCCCA GCGCCCCGCT GGCCACCACC CTGAACCAGA TCGCCAGCCA GTCGGGCATC
GCCCTGGCCA TCGACCCGGC ACTGGTCAGC GGCCGAAACT CGGCGCCGGT CAACGGCCAG
TACGACGGCC TCGGCGCCCT GCAGGCCGCC CTGCTCGGTA CCGGCCTGCA GCTGCAGCAG
AGCACTGTCG GCAGCTACAG CCTGGTGGCT GTTCCTGATG GCAGCCTGGC GTTGCCCGAG
ACCGCGATCA ATGCCGATGC ATCGTACGAA AGCGCCTGGG GCCCGGTTGA CGGCTACCTG
GCCAAACGCA GCGCCGCGGG CACCAAGACC GATACCGCGC TGGTCGAAAT TCCTCGTTCG
ATCTCCGTCG CCACCCGTCA ACAGATGAGC GACCGCGGCG TTCACAGCCT GGATGATGCG
GTGCGCTACA TGCCCGGCAT CGTATCGGCC AGTTTCGGCA GCGACACACG CTATGACTGG
ATGCGCGTGA GGGGCTTCGA ACCGACTCAG TTCCTCGACG GCCTGCCGCT GCCACGTGGC
GTTTACGCTA ACCCGAAAGC CGAAACCTGG AACCTGGACC GCCTCGCATT GCTGCGTGGC
CCAGCGTCCT CACTCTACGG CCAGACCCCA CCCGGCGGCC TGCTGGACAT GGTCAGCCGC
CGTCCGCAGG CCGAAAGCGC AAATGAAATC GAAGTGCAAT ACGGCAGCGA CAACCACCGC
CAGATCAACT TCGCCAGCAC CGGCAAAATC GATGACCAAG GGCAGTTCCT GTACGGCGTC
AGTGGCGTGA TTCGCGATGG CGGAACGCAG ATCGACCATA TAGACGACAA ACGCTACAAC
ATTGCCCCAA GCCTGACCTG GAACATCGAC GACGACACGT CACTGACCCT GCTGACCCAG
TTCACCCGCG ACGATACAGG CGCTACCAGC CAGTTCCGCC CCATTCAGGG CACCAAGATC
GACATGCCAT TCGGTAAGAT CTCCCACCAC AAGAACCTGG GGGATCCGGA CTACGAGTTC
TACGACCGTA CCTACTACGC GCTGGGCTAC GCCTTCGAGC ACCGGATCAA CGATGTGTGG
CAGTTCCGCC AGAACCTTCG CTATACCAAG ACTGACCTGT CCTTTCAGAC CATCACCCCT
GGCAGCTACA ACACAACCAC TCCTCCGGTA CAAGACGACG GTACCGTCAG CCGTATGTCC
ACCAACACCG ATGAAGACAT CAGCCAATTT GCAGTGGATA ACAACTTCCA GGCTGACTTC
ACCACTGGGG ACATCAGCCA CACCCTGCTG GTCGGCCTGG ACCACCAACG TGTCAACACC
AATTACCTGT CGATCTTCGG CTTCAACGTG CCGGACAGCA ACGTCATCAA CCCGGTCTAC
GGGCTGCCAA TCACACGGCC GGATCGCTCC ACGGCGTTCT ATGACTACAA CCAGAAAACC
CGCCAGACCG GCCTGTATGT TCAGGACCAG ATGGCGTTGG GCAACTGGCG CCTGACGCTG
GGCGGTCGTG AAGACTGGGT GCATACCAGC ACCAGGTTCC TGAACCAGGG CGATGCCACC
AACACCCAGA GAGACAAGAA ATTCAGCGGC AACGCGGCCA TCAGCTACGT CTTCGACTCG
GGCTTCGTGC CTTACCTTTC GTATGCCGAG TCGTTCCAGC CGGTCAGCAA TGCTGCCGCA
TCCGCCACGG AGTCTTTCAA ACCGACCGAA GGCAAGCAGT GGGAACTGGG CATCAAATAC
CAGCCACCGG GCTCCAACAC CCTGTTGTCC GCAGCCGTAT ATGACCTGAC CCAGAAAAAC
GTCTCGGTCA CCAACAACGA GGGCGGTGTG ACCGTTACTA GCCAGACCGG CGAAGTGAAG
GTTCGTGGCC TGGAGTTGGA AGCCGTTTCC GACGTCACCG AAAATCTGAA GGTGACTGCG
GCCTACACCT TGGCCAAATC CGAAGTGCAG GACGGCATCT ACAAAGGCAA CCGCCTGCAA
CTGATGCCTA ACCAGCAGGC CTCGCTGTGG GCCGATTACA CCTGGCACAC CGGCGTGCTC
GACGGCTTCG GCATCGGCGC TGGCGCGCGC TACACCGGAA ACACCTATGG CGATCAGGGC
AACACCTGGC TGGGCAAGGC CGATGCGTAC ACCGTGTTCG ATGCCTCCGT GCACTACGAC
CTGGGGCGCC TGAGCTCCAG CCTGAAGGGC GCATCGGTAG CGGTCAACGC GACCAACGTG
TTCAACAAGG ACTACATCTC CACCTGTGAC AGTTACTACT GCTACTACGG TGACGAGCGT
AGCGTCGTCG CCAGCGCCAG CTACAAGTTC TGA
 
Protein sequence
MSRAVDRILR PSLMALAIAL AAPLASTALF AAEQSAQRAY DLPSAPLATT LNQIASQSGI 
ALAIDPALVS GRNSAPVNGQ YDGLGALQAA LLGTGLQLQQ STVGSYSLVA VPDGSLALPE
TAINADASYE SAWGPVDGYL AKRSAAGTKT DTALVEIPRS ISVATRQQMS DRGVHSLDDA
VRYMPGIVSA SFGSDTRYDW MRVRGFEPTQ FLDGLPLPRG VYANPKAETW NLDRLALLRG
PASSLYGQTP PGGLLDMVSR RPQAESANEI EVQYGSDNHR QINFASTGKI DDQGQFLYGV
SGVIRDGGTQ IDHIDDKRYN IAPSLTWNID DDTSLTLLTQ FTRDDTGATS QFRPIQGTKI
DMPFGKISHH KNLGDPDYEF YDRTYYALGY AFEHRINDVW QFRQNLRYTK TDLSFQTITP
GSYNTTTPPV QDDGTVSRMS TNTDEDISQF AVDNNFQADF TTGDISHTLL VGLDHQRVNT
NYLSIFGFNV PDSNVINPVY GLPITRPDRS TAFYDYNQKT RQTGLYVQDQ MALGNWRLTL
GGREDWVHTS TRFLNQGDAT NTQRDKKFSG NAAISYVFDS GFVPYLSYAE SFQPVSNAAA
SATESFKPTE GKQWELGIKY QPPGSNTLLS AAVYDLTQKN VSVTNNEGGV TVTSQTGEVK
VRGLELEAVS DVTENLKVTA AYTLAKSEVQ DGIYKGNRLQ LMPNQQASLW ADYTWHTGVL
DGFGIGAGAR YTGNTYGDQG NTWLGKADAY TVFDASVHYD LGRLSSSLKG ASVAVNATNV
FNKDYISTCD SYYCYYGDER SVVASASYKF