Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4852 |
Symbol | |
ID | 6113842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5351846 |
End bp | 5354278 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641624664 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001751697 |
Protein GI | 170724009 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTG CCGTTGATCG TATCCTGCGC CCCAGCCTGA TGGCCTTGGC CATCGCCCTG GCTGCCCCGT TGGCCAGCAC TGCCCTGTTC GCCGCCGAGC AGTCCGCACA GCGCGCCTAC GACCTGCCCA GCGCCCCGCT GGCCACCACC CTGAACCAGA TCGCCAGCCA GTCGGGCATC GCCCTGGCCA TCGACCCGGC ACTGGTCAGC GGCCGAAACT CGGCGCCGGT CAACGGCCAG TACGACGGCC TCGGCGCCCT GCAGGCCGCC CTGCTCGGTA CCGGCCTGCA GCTGCAGCAG AGCACTGTCG GCAGCTACAG CCTGGTGGCT GTTCCTGATG GCAGCCTGGC GTTGCCCGAG ACCGCGATCA ATGCCGATGC ATCGTACGAA AGCGCCTGGG GCCCGGTTGA CGGCTACCTG GCCAAACGCA GCGCCGCGGG CACCAAGACC GATACCGCGC TGGTCGAAAT TCCTCGTTCG ATCTCCGTCG CCACCCGTCA ACAGATGAGC GACCGCGGCG TTCACAGCCT GGATGATGCG GTGCGCTACA TGCCCGGCAT CGTATCGGCC AGTTTCGGCA GCGACACACG CTATGACTGG ATGCGCGTGA GGGGCTTCGA ACCGACTCAG TTCCTCGACG GCCTGCCGCT GCCACGTGGC GTTTACGCTA ACCCGAAAGC CGAAACCTGG AACCTGGACC GCCTCGCATT GCTGCGTGGC CCAGCGTCCT CACTCTACGG CCAGACCCCA CCCGGCGGCC TGCTGGACAT GGTCAGCCGC CGTCCGCAGG CCGAAAGCGC AAATGAAATC GAAGTGCAAT ACGGCAGCGA CAACCACCGC CAGATCAACT TCGCCAGCAC CGGCAAAATC GATGACCAAG GGCAGTTCCT GTACGGCGTC AGTGGCGTGA TTCGCGATGG CGGAACGCAG ATCGACCATA TAGACGACAA ACGCTACAAC ATTGCCCCAA GCCTGACCTG GAACATCGAC GACGACACGT CACTGACCCT GCTGACCCAG TTCACCCGCG ACGATACAGG CGCTACCAGC CAGTTCCGCC CCATTCAGGG CACCAAGATC GACATGCCAT TCGGTAAGAT CTCCCACCAC AAGAACCTGG GGGATCCGGA CTACGAGTTC TACGACCGTA CCTACTACGC GCTGGGCTAC GCCTTCGAGC ACCGGATCAA CGATGTGTGG CAGTTCCGCC AGAACCTTCG CTATACCAAG ACTGACCTGT CCTTTCAGAC CATCACCCCT GGCAGCTACA ACACAACCAC TCCTCCGGTA CAAGACGACG GTACCGTCAG CCGTATGTCC ACCAACACCG ATGAAGACAT CAGCCAATTT GCAGTGGATA ACAACTTCCA GGCTGACTTC ACCACTGGGG ACATCAGCCA CACCCTGCTG GTCGGCCTGG ACCACCAACG TGTCAACACC AATTACCTGT CGATCTTCGG CTTCAACGTG CCGGACAGCA ACGTCATCAA CCCGGTCTAC GGGCTGCCAA TCACACGGCC GGATCGCTCC ACGGCGTTCT ATGACTACAA CCAGAAAACC CGCCAGACCG GCCTGTATGT TCAGGACCAG ATGGCGTTGG GCAACTGGCG CCTGACGCTG GGCGGTCGTG AAGACTGGGT GCATACCAGC ACCAGGTTCC TGAACCAGGG CGATGCCACC AACACCCAGA GAGACAAGAA ATTCAGCGGC AACGCGGCCA TCAGCTACGT CTTCGACTCG GGCTTCGTGC CTTACCTTTC GTATGCCGAG TCGTTCCAGC CGGTCAGCAA TGCTGCCGCA TCCGCCACGG AGTCTTTCAA ACCGACCGAA GGCAAGCAGT GGGAACTGGG CATCAAATAC CAGCCACCGG GCTCCAACAC CCTGTTGTCC GCAGCCGTAT ATGACCTGAC CCAGAAAAAC GTCTCGGTCA CCAACAACGA GGGCGGTGTG ACCGTTACTA GCCAGACCGG CGAAGTGAAG GTTCGTGGCC TGGAGTTGGA AGCCGTTTCC GACGTCACCG AAAATCTGAA GGTGACTGCG GCCTACACCT TGGCCAAATC CGAAGTGCAG GACGGCATCT ACAAAGGCAA CCGCCTGCAA CTGATGCCTA ACCAGCAGGC CTCGCTGTGG GCCGATTACA CCTGGCACAC CGGCGTGCTC GACGGCTTCG GCATCGGCGC TGGCGCGCGC TACACCGGAA ACACCTATGG CGATCAGGGC AACACCTGGC TGGGCAAGGC CGATGCGTAC ACCGTGTTCG ATGCCTCCGT GCACTACGAC CTGGGGCGCC TGAGCTCCAG CCTGAAGGGC GCATCGGTAG CGGTCAACGC GACCAACGTG TTCAACAAGG ACTACATCTC CACCTGTGAC AGTTACTACT GCTACTACGG TGACGAGCGT AGCGTCGTCG CCAGCGCCAG CTACAAGTTC TGA
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Protein sequence | MSRAVDRILR PSLMALAIAL AAPLASTALF AAEQSAQRAY DLPSAPLATT LNQIASQSGI ALAIDPALVS GRNSAPVNGQ YDGLGALQAA LLGTGLQLQQ STVGSYSLVA VPDGSLALPE TAINADASYE SAWGPVDGYL AKRSAAGTKT DTALVEIPRS ISVATRQQMS DRGVHSLDDA VRYMPGIVSA SFGSDTRYDW MRVRGFEPTQ FLDGLPLPRG VYANPKAETW NLDRLALLRG PASSLYGQTP PGGLLDMVSR RPQAESANEI EVQYGSDNHR QINFASTGKI DDQGQFLYGV SGVIRDGGTQ IDHIDDKRYN IAPSLTWNID DDTSLTLLTQ FTRDDTGATS QFRPIQGTKI DMPFGKISHH KNLGDPDYEF YDRTYYALGY AFEHRINDVW QFRQNLRYTK TDLSFQTITP GSYNTTTPPV QDDGTVSRMS TNTDEDISQF AVDNNFQADF TTGDISHTLL VGLDHQRVNT NYLSIFGFNV PDSNVINPVY GLPITRPDRS TAFYDYNQKT RQTGLYVQDQ MALGNWRLTL GGREDWVHTS TRFLNQGDAT NTQRDKKFSG NAAISYVFDS GFVPYLSYAE SFQPVSNAAA SATESFKPTE GKQWELGIKY QPPGSNTLLS AAVYDLTQKN VSVTNNEGGV TVTSQTGEVK VRGLELEAVS DVTENLKVTA AYTLAKSEVQ DGIYKGNRLQ LMPNQQASLW ADYTWHTGVL DGFGIGAGAR YTGNTYGDQG NTWLGKADAY TVFDASVHYD LGRLSSSLKG ASVAVNATNV FNKDYISTCD SYYCYYGDER SVVASASYKF
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