| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4846 |
|---|
| Symbol | |
|---|
| ID | 6113836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5344503 |
|---|
| End bp | 5346680 |
|---|
| Gene Length | 2178 bp |
|---|
| Protein Length | 725 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641624658 |
|---|
| Product | malate synthase G |
|---|
| Protein accession | YP_001751691 |
|---|
| Protein GI | 170724003 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2225] Malate synthase |
|---|
| TIGRFAM ID | [TIGR01345] malate synthase G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000255535 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGAT ACGTTCAAGT CGGTGGCCTT CAGGTCGCCA AGGCCCTGTA CGACTTCGTC
AACAACGAAG CGATCCCTGG AACCGGCGTC AAGGCCGATG CGTTCTGGGC CGGGGCAGAA
AAGATCATCA ACGACCTCGC CCCAAAGAAC AAAGCCCTGC TCGCCAAGCG CGACGAGCTG
CAAGCCAAGA TCGACGCCTG GCACCAGGCA CGCAAAGGCC AGGCACACGA CGCCGTAGCC
TATAAAAGCT TCCTTCAGGA TATCGGCTAT CTGCTGCCAC AAGCCGACGA TTTCCAGGCC
ACCACCCAGA ACGTGGACGA AGAAATTGCC CACATGGCAG GCCCACAGCT GGTCGTGCCG
GTGATGAACG CCCGCTTTGC CCTGAACGCC GCCAACGCCC GCTGGGGTTC GCTGTACGAC
GCACTGTACG GCACCGACGC CATCAGCGAT GAAGGCGGCG CCGAAAAAGG TCAGGGCTAC
AACAAGGTCC GTGGCAACAA GGTCATCGCC TTCGCCCGCG CCTTCCTCGA CGAAGCCGCG
CCGCTGGCTG CTGGCTCGCA CGTCGACTCC ACCGCTTACC GCATCGAAGG CGGCAAGCTG
GTCGTTGCCC TCAAGGGCGG CAGCAACAGC GGCCTGCGTG ACGACGCCCA GCTGATCGGC
TTCCATGGCG ATGCCGCCGC GCCAACCGCC GTGCTGCTCA AGCACAATGG CCTGCACTTC
GAAATCCAGG TCGATGCCAG CACCCCGGTC GGCAGCACCG ACGCCGCCGG TGTCAAAGAC
ATCCTGATGG AATCGGCGCT GACCACCATC ATGGACTGTG AAGACTCGGT CGCTGCCGTC
GATGCCGACG ACAAGGTCAT TGTCTACCGC AACTGGCTGG GCCTGATGAA AGGCGACTTG
GCCGAGAACG TCAGCAAAGG CGGCAAGACC TTCACCCGCA CCATGAACCC GGACCGCGAG
TACGCAGCGC CCAATGGCGG CACCGTGACC CTTCACGGTC GTTCGCTGCT GTTCGTGCGC
AACGTGGGTC ACCTGATGAC CAACCCGGCA ATTCTCGACG CCCAAGGCAA CGAGATTCCC
GAAGGCATCC AGGACGGTCT GTTCACCAAC CTGATCGCCC TGCACAACCT CAACGGCAAC
ACCAGCCGCA AGAACACCCG TACCGGTAGC GTCTACATCG TCAAACCGAA GATGCACGGC
CCTGAAGAAG TGGCGTTCGC CGCCGAGATC TTCAGCCGCG TCGAAGACCT GCTGGGCATG
CCGCGCAACA CCGTCAAGGT CGGCATCATG GACGAGGAGC GCCGTACCAC GGTGAACCTC
AAGGCTTGCA TCAAGTCGGC CGCCGAGCGC GTGGTGTTCA TCAACACTGG CTTCCTCGAC
CGTACCGGCG ACGAGATTCA CACCTCGATG GAGGCCGGCG CCGTGGTGCG CAAAGGCGCC
ATGAAGAACG AGAAGTGGAT CGGCGCCTAC GAGAACAACA ACGTCGACGT CGGTCTTGCC
ACCGGCCTGC AAGGCCGTGC GCAGATCGGC AAAGGCATGT GGGCCATGCC GGACCTGATG
GCCGCCATGC TCGAGCAGAA GATCGCTCAC CCGCTGGCCG GTGCCAACAC CGCTTGGGTT
CCTTCGCCGA CCGCCGCCAC CCTGCACGCC CTGCACTACC ATAAAGTCGA CGTGCAGGCG
CGTCAGCGCG AGCTGGCCAG CCGCACCCCG GCCTCGGTCG ACGACATCCT GACCATCCCG
CTGGCAGCTG ACACCAACTG GTCGGCAGAA GAGATCCGCA ACGAGCTGGA CAACAACGCC
CAGGGCATCC TCGGCTATGT GGTTCGCTGG ATCGACCAGG GCGTGGGTTG CTCCAAAGTG
CCGGACATCA ACGATGTGGG CCTGATGGAA GACCGCGCTA CCCTGCGTAT CTCGGCCCAG
CTGCTGGCCA ACTGGCTGCG CCATGGCGTG GTTACCCAGG AGCAGGTGCT GGAAAGCCTC
CAGCGCATGG CCGCCGTGGT CGACAAGCAG AACGCCGGTG ACGCCCTGTA CCGCCCGATG
GCGCCGAACT TCGACGACAA CGTGGCATTC CAGGCTGCAG TGGAACTGGT AATCGAGGGT
GCCAAGCAAC CGAACGGTTA TACCGAGCCG GTACTGCACC GTCGCCGCCG CGAGTTCAAG
GCGCGTAACG GGCTGTAA
|
|---|
| Protein sequence | MTGYVQVGGL QVAKALYDFV NNEAIPGTGV KADAFWAGAE KIINDLAPKN KALLAKRDEL
QAKIDAWHQA RKGQAHDAVA YKSFLQDIGY LLPQADDFQA TTQNVDEEIA HMAGPQLVVP
VMNARFALNA ANARWGSLYD ALYGTDAISD EGGAEKGQGY NKVRGNKVIA FARAFLDEAA
PLAAGSHVDS TAYRIEGGKL VVALKGGSNS GLRDDAQLIG FHGDAAAPTA VLLKHNGLHF
EIQVDASTPV GSTDAAGVKD ILMESALTTI MDCEDSVAAV DADDKVIVYR NWLGLMKGDL
AENVSKGGKT FTRTMNPDRE YAAPNGGTVT LHGRSLLFVR NVGHLMTNPA ILDAQGNEIP
EGIQDGLFTN LIALHNLNGN TSRKNTRTGS VYIVKPKMHG PEEVAFAAEI FSRVEDLLGM
PRNTVKVGIM DEERRTTVNL KACIKSAAER VVFINTGFLD RTGDEIHTSM EAGAVVRKGA
MKNEKWIGAY ENNNVDVGLA TGLQGRAQIG KGMWAMPDLM AAMLEQKIAH PLAGANTAWV
PSPTAATLHA LHYHKVDVQA RQRELASRTP ASVDDILTIP LAADTNWSAE EIRNELDNNA
QGILGYVVRW IDQGVGCSKV PDINDVGLME DRATLRISAQ LLANWLRHGV VTQEQVLESL
QRMAAVVDKQ NAGDALYRPM APNFDDNVAF QAAVELVIEG AKQPNGYTEP VLHRRRREFK
ARNGL
|
|---|
| |