Gene PputW619_4840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4840 
Symbol 
ID6113830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5338626 
End bp5339684 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content61% 
IMG OID641624652 
Productbiotin synthase 
Protein accessionYP_001751685 
Protein GI170723997 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.738334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA GCACAACTGC AACAACACGT CACGACTGGT CCCTGGCCGA GGTGAAGGCC 
CTGTTCCAGC TTCCGTTCAA CGACCTGCTG TTCCAGGCGC AAACCGTGCA CCGGGCGCAT
TTCGACCCTA ACCGCGTGCA GGTTTCCACG CTGCTGTCGA TCAAGACCGG CGCCTGCCCG
GAAGATTGCA AATATTGTCC ACAGTCGGGC CACTACAACA CCGGGCTGGA AAAACAGAAG
CTGATGGAAG TGCAGAAGGT GCTGGAAGAA GCGGCACGGG CCAAGGCCAT CGGTTCGACC
CGCTTCTGCA TGGGCGCGGC CTGGAAGCAC CCATCGGCCA AGGACATGCC CTACGTGCTG
GAAATGGTCA AAGGGGTCAA GGCCATGGGG CTGGAAACCT GCATGACCCT CGGCAAGCTC
GATCAGGACC AGACCCAGGC GCTTGCCCAG GCAGGACTGG ATTACTACAA CCACAACCTC
GATACCTCGC CGGAGTTCTA CGGCAGCATC ATCACCACCC GTACTTACAG CGAGCGTCTG
CAGACCTTGG CCTACGTACG CGATGCCGGG ATGAAGATCT GCTCCGGTGG CATCCTCGGG
ATGGGCGAGT CGCTCGACGA TCGTGCAGGC CTGTTGATCC AGTTGGCCAA CCTCCCCGAG
CATCCCGAGT CGGTGCCGAT CAACATGCTT GTGAAAGTGG CCGGTACCCC CCTGGCCGAA
GAAGAAGATG TCGACCCGTT CGACTTCATC CGTATGCTGG CGGTCGCGCG GTTGCTGATG
CCCAAGTCGC ATGTGCGCCT GTCCGCCGGC CGCGAGCAGA TGAACGAGCA GATGCAAGCG
CTGGCCTTCA TGGCCGGGGC CAATTCGATC TTCTATGGCG AGAAACTGCT GACCACCGCC
AACCCTCAGG CCGACAAGGA CATGCAGCTG TTCGCTCGCC TGGGCATCAA GCCTGAAGCG
CGTGAAGAGC ATGCCGACGA AGTGCACCAG GCCGCCATCG AGCAGGCGCT GGTAGAGCAA
CGCAGCAGCG AGCTGTTCTA TAACGCCGCG TCTGCCTGA
 
Protein sequence
MSASTTATTR HDWSLAEVKA LFQLPFNDLL FQAQTVHRAH FDPNRVQVST LLSIKTGACP 
EDCKYCPQSG HYNTGLEKQK LMEVQKVLEE AARAKAIGST RFCMGAAWKH PSAKDMPYVL
EMVKGVKAMG LETCMTLGKL DQDQTQALAQ AGLDYYNHNL DTSPEFYGSI ITTRTYSERL
QTLAYVRDAG MKICSGGILG MGESLDDRAG LLIQLANLPE HPESVPINML VKVAGTPLAE
EEDVDPFDFI RMLAVARLLM PKSHVRLSAG REQMNEQMQA LAFMAGANSI FYGEKLLTTA
NPQADKDMQL FARLGIKPEA REEHADEVHQ AAIEQALVEQ RSSELFYNAA SA