| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4836 |
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| Symbol | bioD |
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| ID | 6113826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5335226 |
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| End bp | 5335906 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624648 |
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| Product | dithiobiotin synthetase |
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| Protein accession | YP_001751681 |
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| Protein GI | 170723993 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0132] Dethiobiotin synthetase |
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| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.519377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGG CCTATTTCAT CGCGGGTACC GATACCGATG TCGGCAAGAC CACCATCGCA
GCGGGGCTGT TGCATGCCGC ACGGCTGCAG GGCCTGAGTA CGCTGGGTGC AAAGCCGGTG
GCGTCCGGCT GCACAGTTAC CACAAAGGGG CTGCGCAACG CTGACGCCCA GGCATTGATC
GACGAGAGCA CGCTCAAACT GCCTTATGAA GCGATCAACC CTTTTGCATT TGAACCTGCC
ATCGCGCCGC ACGTGGCGGC GCGTGAAGCG GGTGTGACGC TGGAGGTGCC GGCCCTGCTC
CAGGCCATGC GTCACGTGCT GGATCAGGGC GCGGATTTCA CCCTGGTCGA AGGTGCCGGT
GGCTGGCGCG TGCCGCTGTC TGGTCATGCC AACCTGTCTG ACCTGGCAAT CGCCCTCAAG
TTGCCGGTGA TTCTAGTGGT AGGGGTGCGT CTTGGCTGCA TCAACCACGC ATTGCTCAGC
GCCGAAGCGA TCGCCAGGGA CGGGTTGCAA CTGGCAGGCT GGGTGGCCAA TGTCATCGAC
CCGCGTACGT CGCGGCTGGA GGAGAACCTC GCCAGCCTGG CCGAGCGCTT GCCAGCGCCT
TGCCTGGGGC GGGTGCCCAA GCTCAAGCAG GCGACTGCCG ATGCAGTCGC GGAACATCTG
CAGCTGGACT TGCTGGACTG A
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| Protein sequence | MSQAYFIAGT DTDVGKTTIA AGLLHAARLQ GLSTLGAKPV ASGCTVTTKG LRNADAQALI
DESTLKLPYE AINPFAFEPA IAPHVAAREA GVTLEVPALL QAMRHVLDQG ADFTLVEGAG
GWRVPLSGHA NLSDLAIALK LPVILVVGVR LGCINHALLS AEAIARDGLQ LAGWVANVID
PRTSRLEENL ASLAERLPAP CLGRVPKLKQ ATADAVAEHL QLDLLD
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