| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4828 |
|---|
| Symbol | |
|---|
| ID | 6113818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5324418 |
|---|
| End bp | 5326241 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641624640 |
|---|
| Product | peptidase S9 prolyl oligopeptidase |
|---|
| Protein accession | YP_001751673 |
|---|
| Protein GI | 170723985 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA CTCACGTGTC ATTGCCCGCG GGTGAATTCA GTGCCGCGCA GGCCGTCGCC
GCCGGCACCG ATTTCGCCGA ACTCAAAGCC AGCCCCAAAG GCCTGTTCTG GAATGAATTT
CGCCCGGCCG ACGGTGCCTG CCGCATCTGG TGCTGGCGTG ACCAGCAGGC ACGCTGCCTC
ACGCCTGACG GCTTCAGCGT GCGCAGCCGG GTCTATGAAT ACGGTGGAGG CAGTTTCTGC
CTGAGCGATG ACGCAGTGGT GTTCGTCAAC GAGAAGGACC AGCAGATCTA TCACCAGGGA
CTTGATGGCG CGCCACCGCA TGCGTTGACC CAGAATGCCC AATGCCGCTA CGGCGACCTG
CAATGGCACG ACGGCCAAGT GCTGGCGGTC GAGGAGTGCC ATGGCGAGAG TGTGGAACAT
CGCCTGGTGG CATTGGGTGA GGGCACCGTT GAAGTGCTCG CCGCAGGCGC TGATTTCTAT
GCATCCCCTA CGATCAGCGC CGATGGCACA CGTCTGGCCT GGATCGAATG GGACCGACCG
GCGCAGCCAT GGACAGTCAC ACGGCTGATG TGTCGCGAAC GGCAAAGTGA CGGTAGCTGG
GGCGCGCCGC GCTGCATCGC GGCGAATGAC GAATCCCTCC AGCAACCGCG CTTCGACGCT
GAAGGGCGCT TGTACTGCCT GTCCGACCGT AATGGTTTCT GGCAGCCCTG GGGCGAGCTC
GACGGGCTAT GGCAAGCCTT GCCGGCCGAG CCTGCGGACC ACGCTGCCGC CCCCTGGCAA
CTGGGCACCA GTACCTGGCT GGCACTCGGA CCACAAAGCT ACCTGGCCAG TTGGTTCGAA
GGTGGCGTAG GGCAACTCGG GCTACGCACA GCCGACGGTC AGATGGAGCG TTTCGCCAGT
GCCTATAGTC GTTTTCGTAG CCTGGCCATC GACGCCGGGC ATCTCTACGC AATCGCTGCC
TCGCCGATCA GCCCGCCAGC CGTCATTGCC ATTGACCGGG CAAGCCACGA AGTACGGGTT
CTGGCAGGCG GCGCCGAGTT ACTGCCAGCC GATTGCATCA GCCTGCCGCA ATCCATCCTC
TACGACAGTG GCGGTGAGGT TGCCCATGGT TTCTTTTATC CGGCAGCCGG CGCCAAAGGG
CCTTCCCCAC TGGTGGTGTT CATCCATGGT GGGCCAACCT CAGCCTGCTA TCCGGTCCTG
GACCCACGGG TTCAGTACTG GACCCAGCGT GGCTTTGCCG TTGCCGACCT GAACTATCGG
GGCAGTACTG GTTATGGTCG CGAATATCGC CAGGCCCTGC ACTTGCGCTG GGGCCAGAGC
GATGTTCAGG ATGCCTGCGC GGCGGTCGAA CACTTGGCCG AACGCGGTTT GATAGACCCC
CGCAAAGCCT TCATACGTGG TGGCAGTGCC GGCGGTTATA CCACCCTGTG CGCCCTGGCG
TTCCATGACG TCTTCCGTGC CGGTGCCAGC CTCTACGGGG TGAGTGACCC GGTTGCGCTT
GGCCGCGCCA CGCACAAGTT CGAAGGCGAT TACCTCGACT GGCTGATCGG TGACCCGCAA
CAGGATGCCG AGCGCTATCG CCAACGTACT CCACTGCTGC ACGCCGAGCA GATCAACGTA
CCGGTGATTT TCTTTCAGGG TGAACTGGAT GCTGTGGTGG TGCCGGAGCA GACGCGCTCG
ATGCTTGAAG CGTTAACGGC CAATGGCATC GAGGCCGAGG GGCACTTCTA TGCGGGCGAA
CGGCATGGCT TTCGAAAGGC CGAAAACCTT GCACATGCCC TTGAGGAGGA ATGGAAATTC
TATTGCCGGG TGCTGGCCCT GTGA
|
|---|
| Protein sequence | MSATHVSLPA GEFSAAQAVA AGTDFAELKA SPKGLFWNEF RPADGACRIW CWRDQQARCL
TPDGFSVRSR VYEYGGGSFC LSDDAVVFVN EKDQQIYHQG LDGAPPHALT QNAQCRYGDL
QWHDGQVLAV EECHGESVEH RLVALGEGTV EVLAAGADFY ASPTISADGT RLAWIEWDRP
AQPWTVTRLM CRERQSDGSW GAPRCIAAND ESLQQPRFDA EGRLYCLSDR NGFWQPWGEL
DGLWQALPAE PADHAAAPWQ LGTSTWLALG PQSYLASWFE GGVGQLGLRT ADGQMERFAS
AYSRFRSLAI DAGHLYAIAA SPISPPAVIA IDRASHEVRV LAGGAELLPA DCISLPQSIL
YDSGGEVAHG FFYPAAGAKG PSPLVVFIHG GPTSACYPVL DPRVQYWTQR GFAVADLNYR
GSTGYGREYR QALHLRWGQS DVQDACAAVE HLAERGLIDP RKAFIRGGSA GGYTTLCALA
FHDVFRAGAS LYGVSDPVAL GRATHKFEGD YLDWLIGDPQ QDAERYRQRT PLLHAEQINV
PVIFFQGELD AVVVPEQTRS MLEALTANGI EAEGHFYAGE RHGFRKAENL AHALEEEWKF
YCRVLAL
|
|---|
| |