Gene PputW619_4793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4793 
Symbol 
ID6113782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5282010 
End bp5284397 
Gene Length2388 bp 
Protein Length795 aa 
Translation table11 
GC content64% 
IMG OID641624604 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001751638 
Protein GI170723950 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.271636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT TGCGTCGCCT GTTGGTTATC GGCTGCTTGT GGCTACCCTT GATTGCTTTG 
GCAAGGCCTG AGGCAGCACC TGCGGTGGTA CTCGAACCTG CCCAGCAGCA ATGGCTGGAC
ACCCATCGCA GTCTGCGGGT CGGCCTGGTG CTGCAGGCGC CCTATGCCCA GTTCGACCGC
CGTCTGCAGC AACTCTACGG GGCCAATGTC GAGCTGGTGA ACTGGCTGGC GCAGGCGCTG
AAGCTGGACC TCACCTGGCG CAACTTCACT GACCAGGCCA GTCTCGAACA CGCCCTGCAA
GCGGGTGAAA TCGACTTTGC CCCGGGCCTT ACGCAAACAC CGGCCAGCTT GCGTCTGTGG
TTGTTCAGCG ACCCCTACAT GCGTGTGCCG CAGCTGTTGG TCGGGCCGCG CACCGGTGCG
TTGGCCGTCG AGCTGGAAAA ACTTGAAGCC AACGAGCGCG TGGCGGTACG CATGCCCAGC
GTGCTGGCCG AATACCTGCG GGGCAATTAC GCCAATCTCA ACCTGCAAGG TGTGCCCAAC
GAGCGCGAGG CCTTGCAACT GGTGGTAGGG GGCCAGGCCA GCTACGCGGT GCTGGATGAA
GCCCAGCTCA GCCGATTGTC CCGTGAAAGC GAGTTCGGTG AGCTGGCGGT GCTCGGTGAC
ATCGGCCTGC CACAATTATT GCGGGTGGGT TCGCGGCGTG ACTGGCCGTT GCTGGCCGAC
GTGCTTGAAC GGGGCCTGCA GGCCATGCCC GCCAAAGAGC TGGAGCAACT GCATCAGCGT
TGGTTGCAGC CCAAATACGC GCGCCTGAGC GAATCCACCG GTTTCTGGCA AAACCTTGCG
TTGCTGTTCG GCATGTTGCT GTTATGTGCC GGGGCCACCC TGATGTGGCA GCGCCGCCAG
CAACGCCAGC TAGAGCGCAG CCTGCTGGCG GCGCGGGAGC ACCTGGCAGA GCGGCAGGTG
CGCGAGGAGG CACTGCGCCT GAGCCAGTTC GCCATCGACC AGAGCACGGT CGGCATCCTC
TGGGTCAACT GGGACAGCCA CGTGCGTTAC GCCAACCACG CTGTGGGGCG CATGCTCGGT
TATGCCGAGG CGGCGTTGCT GGAGCGTCCG CTGAGCGACT TCGAGCCGAA CCTGAGCATG
GACCGCTGGC TGCAGTTGTG GCGGGCCGCG CGAGCCGGGG AGGCCGGGGC TAGGCAGTTC
GAGACCCAAT GCCTGTGCGC CGATGGCAGC CTGTTGCCGG TGGAGTTGTC GTTGAGCTTC
CTGCGCTTTC GCGATGCCGA GTATCTGGTG GTGTACCTTG CCGATGTCAC CGAACGCCAC
CGTGCTCTGG CGGCGCTGCG TGAAAGCGAG GCGCGGCTCA AGGGTATTGC TGGCAATGTG
CCGGGGCTGG TGTTCCGCCT GGAGCCCGCG CCAGCGGAAG GGGACCCGGA GTTTCCCTAT
ATCAGCGAGG GCAGTGAGGC GTTGGTGGGC TATACGCCCG CGCAGATCCA GCACCCGAAG
ATGGGCTTGC GCAATCTGGT CCACCCGGAT GATCGTGCGG ACTATCACCA GGTTCAGGAC
CTGGCCATTG CCAGTGATCA GGACTGGTCC TGGCAAGGAC GCATCCTCAC CCGCGAAGGT
GAGCAGCGGT GGGCCGACAT CAAGGCCAGT ACCCGCCGCC TGGCCGACGG CCGGGTGGTC
TGGGACGGTG TTGTCTGGGA CATTACCCAA AGCAAACGCG CGGAGCTGGC ACTTGCAAGG
TCCCAGGAGC AACTGCGCGA ACTGTCGGCA CACCTGGAAA GCGTGCGCGA GGAAGAAAAG
GCCCGTATCG CCCGCGAAGT GCACGATGAA CTGGGCCAGA TGCTGACCGT GCTCAAGCTT
GAGGTGTCGA TGTGCGAATT GGCTTTTGCC GAGCTCGACC CTGCGCTGAA CGAGCGCCTG
GCCAGCATGA AGCGCCTGAT CGCTCAGCTG TTCCAGCTGG TGCGCGATGT GGCAACGGCG
TTGCGCCCGC CGATCCTGGA CGCCGGTATC GCTTCGGCCA TCGAATGGCA GGCACGGCGC
TTCGAAGCGC GCACACAGAT CCCCTGCCTG GTGCAGGTAC CGGATAATCT GCCAGCATTG
AGCGATGCAA AAGCCATCGG CTTGTTCCGT ATCCTGCAGG AGGCTCTGAC CAACGTCATG
CGCCACGCCC AGGCGCACAG TGTGGAGGTA GAGCTGGTGC GCGAGGGCGA AAAACTGCGT
ATGACGGTCA GTGATGACGG TAGCGGGTTC TGCCTGGACC AGGCACGGCC AACCTCTTTC
GGCCTGGTGG GGGTGCGTGA GCGGGTACTG ATGCTCGGTG GCAGCATGGT TTTGAATAGC
GAGCCAGGTG AAGGCACCAG CCTGAGCGTG ACCATAGCGT TGGATTAG
 
Protein sequence
MKRLRRLLVI GCLWLPLIAL ARPEAAPAVV LEPAQQQWLD THRSLRVGLV LQAPYAQFDR 
RLQQLYGANV ELVNWLAQAL KLDLTWRNFT DQASLEHALQ AGEIDFAPGL TQTPASLRLW
LFSDPYMRVP QLLVGPRTGA LAVELEKLEA NERVAVRMPS VLAEYLRGNY ANLNLQGVPN
EREALQLVVG GQASYAVLDE AQLSRLSRES EFGELAVLGD IGLPQLLRVG SRRDWPLLAD
VLERGLQAMP AKELEQLHQR WLQPKYARLS ESTGFWQNLA LLFGMLLLCA GATLMWQRRQ
QRQLERSLLA AREHLAERQV REEALRLSQF AIDQSTVGIL WVNWDSHVRY ANHAVGRMLG
YAEAALLERP LSDFEPNLSM DRWLQLWRAA RAGEAGARQF ETQCLCADGS LLPVELSLSF
LRFRDAEYLV VYLADVTERH RALAALRESE ARLKGIAGNV PGLVFRLEPA PAEGDPEFPY
ISEGSEALVG YTPAQIQHPK MGLRNLVHPD DRADYHQVQD LAIASDQDWS WQGRILTREG
EQRWADIKAS TRRLADGRVV WDGVVWDITQ SKRAELALAR SQEQLRELSA HLESVREEEK
ARIAREVHDE LGQMLTVLKL EVSMCELAFA ELDPALNERL ASMKRLIAQL FQLVRDVATA
LRPPILDAGI ASAIEWQARR FEARTQIPCL VQVPDNLPAL SDAKAIGLFR ILQEALTNVM
RHAQAHSVEV ELVREGEKLR MTVSDDGSGF CLDQARPTSF GLVGVRERVL MLGGSMVLNS
EPGEGTSLSV TIALD