Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4793 |
Symbol | |
ID | 6113782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5282010 |
End bp | 5284397 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641624604 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_001751638 |
Protein GI | 170723950 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.271636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGAT TGCGTCGCCT GTTGGTTATC GGCTGCTTGT GGCTACCCTT GATTGCTTTG GCAAGGCCTG AGGCAGCACC TGCGGTGGTA CTCGAACCTG CCCAGCAGCA ATGGCTGGAC ACCCATCGCA GTCTGCGGGT CGGCCTGGTG CTGCAGGCGC CCTATGCCCA GTTCGACCGC CGTCTGCAGC AACTCTACGG GGCCAATGTC GAGCTGGTGA ACTGGCTGGC GCAGGCGCTG AAGCTGGACC TCACCTGGCG CAACTTCACT GACCAGGCCA GTCTCGAACA CGCCCTGCAA GCGGGTGAAA TCGACTTTGC CCCGGGCCTT ACGCAAACAC CGGCCAGCTT GCGTCTGTGG TTGTTCAGCG ACCCCTACAT GCGTGTGCCG CAGCTGTTGG TCGGGCCGCG CACCGGTGCG TTGGCCGTCG AGCTGGAAAA ACTTGAAGCC AACGAGCGCG TGGCGGTACG CATGCCCAGC GTGCTGGCCG AATACCTGCG GGGCAATTAC GCCAATCTCA ACCTGCAAGG TGTGCCCAAC GAGCGCGAGG CCTTGCAACT GGTGGTAGGG GGCCAGGCCA GCTACGCGGT GCTGGATGAA GCCCAGCTCA GCCGATTGTC CCGTGAAAGC GAGTTCGGTG AGCTGGCGGT GCTCGGTGAC ATCGGCCTGC CACAATTATT GCGGGTGGGT TCGCGGCGTG ACTGGCCGTT GCTGGCCGAC GTGCTTGAAC GGGGCCTGCA GGCCATGCCC GCCAAAGAGC TGGAGCAACT GCATCAGCGT TGGTTGCAGC CCAAATACGC GCGCCTGAGC GAATCCACCG GTTTCTGGCA AAACCTTGCG TTGCTGTTCG GCATGTTGCT GTTATGTGCC GGGGCCACCC TGATGTGGCA GCGCCGCCAG CAACGCCAGC TAGAGCGCAG CCTGCTGGCG GCGCGGGAGC ACCTGGCAGA GCGGCAGGTG CGCGAGGAGG CACTGCGCCT GAGCCAGTTC GCCATCGACC AGAGCACGGT CGGCATCCTC TGGGTCAACT GGGACAGCCA CGTGCGTTAC GCCAACCACG CTGTGGGGCG CATGCTCGGT TATGCCGAGG CGGCGTTGCT GGAGCGTCCG CTGAGCGACT TCGAGCCGAA CCTGAGCATG GACCGCTGGC TGCAGTTGTG GCGGGCCGCG CGAGCCGGGG AGGCCGGGGC TAGGCAGTTC GAGACCCAAT GCCTGTGCGC CGATGGCAGC CTGTTGCCGG TGGAGTTGTC GTTGAGCTTC CTGCGCTTTC GCGATGCCGA GTATCTGGTG GTGTACCTTG CCGATGTCAC CGAACGCCAC CGTGCTCTGG CGGCGCTGCG TGAAAGCGAG GCGCGGCTCA AGGGTATTGC TGGCAATGTG CCGGGGCTGG TGTTCCGCCT GGAGCCCGCG CCAGCGGAAG GGGACCCGGA GTTTCCCTAT ATCAGCGAGG GCAGTGAGGC GTTGGTGGGC TATACGCCCG CGCAGATCCA GCACCCGAAG ATGGGCTTGC GCAATCTGGT CCACCCGGAT GATCGTGCGG ACTATCACCA GGTTCAGGAC CTGGCCATTG CCAGTGATCA GGACTGGTCC TGGCAAGGAC GCATCCTCAC CCGCGAAGGT GAGCAGCGGT GGGCCGACAT CAAGGCCAGT ACCCGCCGCC TGGCCGACGG CCGGGTGGTC TGGGACGGTG TTGTCTGGGA CATTACCCAA AGCAAACGCG CGGAGCTGGC ACTTGCAAGG TCCCAGGAGC AACTGCGCGA ACTGTCGGCA CACCTGGAAA GCGTGCGCGA GGAAGAAAAG GCCCGTATCG CCCGCGAAGT GCACGATGAA CTGGGCCAGA TGCTGACCGT GCTCAAGCTT GAGGTGTCGA TGTGCGAATT GGCTTTTGCC GAGCTCGACC CTGCGCTGAA CGAGCGCCTG GCCAGCATGA AGCGCCTGAT CGCTCAGCTG TTCCAGCTGG TGCGCGATGT GGCAACGGCG TTGCGCCCGC CGATCCTGGA CGCCGGTATC GCTTCGGCCA TCGAATGGCA GGCACGGCGC TTCGAAGCGC GCACACAGAT CCCCTGCCTG GTGCAGGTAC CGGATAATCT GCCAGCATTG AGCGATGCAA AAGCCATCGG CTTGTTCCGT ATCCTGCAGG AGGCTCTGAC CAACGTCATG CGCCACGCCC AGGCGCACAG TGTGGAGGTA GAGCTGGTGC GCGAGGGCGA AAAACTGCGT ATGACGGTCA GTGATGACGG TAGCGGGTTC TGCCTGGACC AGGCACGGCC AACCTCTTTC GGCCTGGTGG GGGTGCGTGA GCGGGTACTG ATGCTCGGTG GCAGCATGGT TTTGAATAGC GAGCCAGGTG AAGGCACCAG CCTGAGCGTG ACCATAGCGT TGGATTAG
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Protein sequence | MKRLRRLLVI GCLWLPLIAL ARPEAAPAVV LEPAQQQWLD THRSLRVGLV LQAPYAQFDR RLQQLYGANV ELVNWLAQAL KLDLTWRNFT DQASLEHALQ AGEIDFAPGL TQTPASLRLW LFSDPYMRVP QLLVGPRTGA LAVELEKLEA NERVAVRMPS VLAEYLRGNY ANLNLQGVPN EREALQLVVG GQASYAVLDE AQLSRLSRES EFGELAVLGD IGLPQLLRVG SRRDWPLLAD VLERGLQAMP AKELEQLHQR WLQPKYARLS ESTGFWQNLA LLFGMLLLCA GATLMWQRRQ QRQLERSLLA AREHLAERQV REEALRLSQF AIDQSTVGIL WVNWDSHVRY ANHAVGRMLG YAEAALLERP LSDFEPNLSM DRWLQLWRAA RAGEAGARQF ETQCLCADGS LLPVELSLSF LRFRDAEYLV VYLADVTERH RALAALRESE ARLKGIAGNV PGLVFRLEPA PAEGDPEFPY ISEGSEALVG YTPAQIQHPK MGLRNLVHPD DRADYHQVQD LAIASDQDWS WQGRILTREG EQRWADIKAS TRRLADGRVV WDGVVWDITQ SKRAELALAR SQEQLRELSA HLESVREEEK ARIAREVHDE LGQMLTVLKL EVSMCELAFA ELDPALNERL ASMKRLIAQL FQLVRDVATA LRPPILDAGI ASAIEWQARR FEARTQIPCL VQVPDNLPAL SDAKAIGLFR ILQEALTNVM RHAQAHSVEV ELVREGEKLR MTVSDDGSGF CLDQARPTSF GLVGVRERVL MLGGSMVLNS EPGEGTSLSV TIALD
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