| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4793 |
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| Symbol | |
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| ID | 6113782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5282010 |
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| End bp | 5284397 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624604 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001751638 |
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| Protein GI | 170723950 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.271636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAT TGCGTCGCCT GTTGGTTATC GGCTGCTTGT GGCTACCCTT GATTGCTTTG
GCAAGGCCTG AGGCAGCACC TGCGGTGGTA CTCGAACCTG CCCAGCAGCA ATGGCTGGAC
ACCCATCGCA GTCTGCGGGT CGGCCTGGTG CTGCAGGCGC CCTATGCCCA GTTCGACCGC
CGTCTGCAGC AACTCTACGG GGCCAATGTC GAGCTGGTGA ACTGGCTGGC GCAGGCGCTG
AAGCTGGACC TCACCTGGCG CAACTTCACT GACCAGGCCA GTCTCGAACA CGCCCTGCAA
GCGGGTGAAA TCGACTTTGC CCCGGGCCTT ACGCAAACAC CGGCCAGCTT GCGTCTGTGG
TTGTTCAGCG ACCCCTACAT GCGTGTGCCG CAGCTGTTGG TCGGGCCGCG CACCGGTGCG
TTGGCCGTCG AGCTGGAAAA ACTTGAAGCC AACGAGCGCG TGGCGGTACG CATGCCCAGC
GTGCTGGCCG AATACCTGCG GGGCAATTAC GCCAATCTCA ACCTGCAAGG TGTGCCCAAC
GAGCGCGAGG CCTTGCAACT GGTGGTAGGG GGCCAGGCCA GCTACGCGGT GCTGGATGAA
GCCCAGCTCA GCCGATTGTC CCGTGAAAGC GAGTTCGGTG AGCTGGCGGT GCTCGGTGAC
ATCGGCCTGC CACAATTATT GCGGGTGGGT TCGCGGCGTG ACTGGCCGTT GCTGGCCGAC
GTGCTTGAAC GGGGCCTGCA GGCCATGCCC GCCAAAGAGC TGGAGCAACT GCATCAGCGT
TGGTTGCAGC CCAAATACGC GCGCCTGAGC GAATCCACCG GTTTCTGGCA AAACCTTGCG
TTGCTGTTCG GCATGTTGCT GTTATGTGCC GGGGCCACCC TGATGTGGCA GCGCCGCCAG
CAACGCCAGC TAGAGCGCAG CCTGCTGGCG GCGCGGGAGC ACCTGGCAGA GCGGCAGGTG
CGCGAGGAGG CACTGCGCCT GAGCCAGTTC GCCATCGACC AGAGCACGGT CGGCATCCTC
TGGGTCAACT GGGACAGCCA CGTGCGTTAC GCCAACCACG CTGTGGGGCG CATGCTCGGT
TATGCCGAGG CGGCGTTGCT GGAGCGTCCG CTGAGCGACT TCGAGCCGAA CCTGAGCATG
GACCGCTGGC TGCAGTTGTG GCGGGCCGCG CGAGCCGGGG AGGCCGGGGC TAGGCAGTTC
GAGACCCAAT GCCTGTGCGC CGATGGCAGC CTGTTGCCGG TGGAGTTGTC GTTGAGCTTC
CTGCGCTTTC GCGATGCCGA GTATCTGGTG GTGTACCTTG CCGATGTCAC CGAACGCCAC
CGTGCTCTGG CGGCGCTGCG TGAAAGCGAG GCGCGGCTCA AGGGTATTGC TGGCAATGTG
CCGGGGCTGG TGTTCCGCCT GGAGCCCGCG CCAGCGGAAG GGGACCCGGA GTTTCCCTAT
ATCAGCGAGG GCAGTGAGGC GTTGGTGGGC TATACGCCCG CGCAGATCCA GCACCCGAAG
ATGGGCTTGC GCAATCTGGT CCACCCGGAT GATCGTGCGG ACTATCACCA GGTTCAGGAC
CTGGCCATTG CCAGTGATCA GGACTGGTCC TGGCAAGGAC GCATCCTCAC CCGCGAAGGT
GAGCAGCGGT GGGCCGACAT CAAGGCCAGT ACCCGCCGCC TGGCCGACGG CCGGGTGGTC
TGGGACGGTG TTGTCTGGGA CATTACCCAA AGCAAACGCG CGGAGCTGGC ACTTGCAAGG
TCCCAGGAGC AACTGCGCGA ACTGTCGGCA CACCTGGAAA GCGTGCGCGA GGAAGAAAAG
GCCCGTATCG CCCGCGAAGT GCACGATGAA CTGGGCCAGA TGCTGACCGT GCTCAAGCTT
GAGGTGTCGA TGTGCGAATT GGCTTTTGCC GAGCTCGACC CTGCGCTGAA CGAGCGCCTG
GCCAGCATGA AGCGCCTGAT CGCTCAGCTG TTCCAGCTGG TGCGCGATGT GGCAACGGCG
TTGCGCCCGC CGATCCTGGA CGCCGGTATC GCTTCGGCCA TCGAATGGCA GGCACGGCGC
TTCGAAGCGC GCACACAGAT CCCCTGCCTG GTGCAGGTAC CGGATAATCT GCCAGCATTG
AGCGATGCAA AAGCCATCGG CTTGTTCCGT ATCCTGCAGG AGGCTCTGAC CAACGTCATG
CGCCACGCCC AGGCGCACAG TGTGGAGGTA GAGCTGGTGC GCGAGGGCGA AAAACTGCGT
ATGACGGTCA GTGATGACGG TAGCGGGTTC TGCCTGGACC AGGCACGGCC AACCTCTTTC
GGCCTGGTGG GGGTGCGTGA GCGGGTACTG ATGCTCGGTG GCAGCATGGT TTTGAATAGC
GAGCCAGGTG AAGGCACCAG CCTGAGCGTG ACCATAGCGT TGGATTAG
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| Protein sequence | MKRLRRLLVI GCLWLPLIAL ARPEAAPAVV LEPAQQQWLD THRSLRVGLV LQAPYAQFDR
RLQQLYGANV ELVNWLAQAL KLDLTWRNFT DQASLEHALQ AGEIDFAPGL TQTPASLRLW
LFSDPYMRVP QLLVGPRTGA LAVELEKLEA NERVAVRMPS VLAEYLRGNY ANLNLQGVPN
EREALQLVVG GQASYAVLDE AQLSRLSRES EFGELAVLGD IGLPQLLRVG SRRDWPLLAD
VLERGLQAMP AKELEQLHQR WLQPKYARLS ESTGFWQNLA LLFGMLLLCA GATLMWQRRQ
QRQLERSLLA AREHLAERQV REEALRLSQF AIDQSTVGIL WVNWDSHVRY ANHAVGRMLG
YAEAALLERP LSDFEPNLSM DRWLQLWRAA RAGEAGARQF ETQCLCADGS LLPVELSLSF
LRFRDAEYLV VYLADVTERH RALAALRESE ARLKGIAGNV PGLVFRLEPA PAEGDPEFPY
ISEGSEALVG YTPAQIQHPK MGLRNLVHPD DRADYHQVQD LAIASDQDWS WQGRILTREG
EQRWADIKAS TRRLADGRVV WDGVVWDITQ SKRAELALAR SQEQLRELSA HLESVREEEK
ARIAREVHDE LGQMLTVLKL EVSMCELAFA ELDPALNERL ASMKRLIAQL FQLVRDVATA
LRPPILDAGI ASAIEWQARR FEARTQIPCL VQVPDNLPAL SDAKAIGLFR ILQEALTNVM
RHAQAHSVEV ELVREGEKLR MTVSDDGSGF CLDQARPTSF GLVGVRERVL MLGGSMVLNS
EPGEGTSLSV TIALD
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