| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4787 |
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| Symbol | |
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| ID | 6113776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5275970 |
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| End bp | 5276644 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624598 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001751632 |
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| Protein GI | 170723944 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.750334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCT ACGCTATTGC CCCCTCCATT CTCTCCGCCG ATTTCGCCCG TTTGGGCGAG
GACGTCGACA AGGTGCTGGC CGCTGGTGCC GACATCGTCC ACTTCGACGT GATGGACAAC
CACTACGTAC CCAACCTGAC CATTGGCCCG ATGGTCTGCA CCGCCTTGCG CAAGTATGGT
GTGACCGCGC CGATCGATGT GCATCTGATG GTCAGCCCTG TAGACCGCAT CATCGGTGAC
TTCATCGAAG CCGGTGCCAG CTACATCACC TTCCACCCGG AGGCATCGCA GCACATCGAC
CGCTCGCTGC AGCTGATCCG TGACGGTGGC TGCAAGGCCG GCTTGGTGTT CAACCCGGCT
ACCAGCCTGG ACGCGCTGAA GTACGTGATG GACAAGGTCG ACATGGTGCT GCTGATGAGC
GTCAACCCAG GCTTTGGCGG ACAGAAGTTC ATCCCTGGCA CCTTGGACAA ACTGCGCGAA
GCCCGTGCGC TGATCGACGC CAGTGGCCGT GATATCCGCC TGGAAATCGA CGGTGGGGTC
AACGTCAACA ATATCCGTGA GATCGCTGCC GCTGGCGCTG ACACCTTTGT CGCCGGCTCG
GCGATCTTCA ACGCGCCGGA TTATCAGGAA GTGATCGCCA AGATGCGCGC CGAACTGGCT
CAGGCCCGCC CATGA
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| Protein sequence | MQPYAIAPSI LSADFARLGE DVDKVLAAGA DIVHFDVMDN HYVPNLTIGP MVCTALRKYG
VTAPIDVHLM VSPVDRIIGD FIEAGASYIT FHPEASQHID RSLQLIRDGG CKAGLVFNPA
TSLDALKYVM DKVDMVLLMS VNPGFGGQKF IPGTLDKLRE ARALIDASGR DIRLEIDGGV
NVNNIREIAA AGADTFVAGS AIFNAPDYQE VIAKMRAELA QARP
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