| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4784 |
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| Symbol | |
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| ID | 6113773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5271680 |
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| End bp | 5273569 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624595 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001751629 |
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| Protein GI | 170723941 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.336852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAG CACCTTTGCT ACGTTTTACC TTGGCTACGT TGGCGCTCGC CTGCAGCCAG
GCTTTCGCAG CCCCCTCGCC TTACTCGACA ATGATCGTCT TCGGCGACAG CCTCAGCGAT
GCCGGGCAAT TTCCTGACCT GACCGGCGGT ACTGCCGGTA TGCGCTTTAC CAACCGTGAT
GAGAATGGCA ACTTTGCACC TGTCTCGCCG ATGATCCTCG GCGCACGCCT GGGTGTGAAT
CCGGATGAGC TCAACCCATC CACATCATTC GGAATACGCC CCGACGGCAA CAACTGGGCC
GTTGGCGGCT ACACCACGCA GCAGATCCTG GATTCGATCA CCACCACTTC CGAGACAGTC
ATTCCGCCAG GCCAACCTTT TGCCGGCCTG GTACTACGCG ACAAGCCCGG CTATCTGGCC
AATGGCTTGC GCGCAGACCC CAATGCCCTC TACTACCTGA CCGGTGGCGG CAACGACTTC
CTGCAAGGCC TGGTGAGCAG CCCTGCCGAT GCCGCCGCTG CGGGATCGCG CCTGGCAGCC
AGCGCCCAGG CCCTGCAACA AGGTGGCGCC CGCTACATCA TGGTCTGGCT GCTACCCGAC
CTCGGCCAGA CGCCGAACTT CAGTGGCACC CCGCAGCAAA ACGCCCTGTC GCAACTGTCC
AGCGTGTTCA ACCAGTCACT GGTCAGCCAA CTGGGCCAGA TCGATGCCGA AATCATTCCA
CTGAACATTC CCGTACTGCT GAACGAAGCA CTGGCCAGCC CGACGCAATT CGGCCTGGCC
AGCGGGCAGA ATCTGGTCGG CACCTGCTAC AGCGGCAACA GTTGCGTGGA AAACCCACTG
TACGGCATCA ATGGCACCAC ACCCGACCCC ACCAAGCTGC TGTTCAACGA CTCGGTACAC
CCGACCATCG CCGGCCAGCA ACTGATTGCC GACTACGGCT ACTCGATCCT TTCCGCACCC
TGGGAGCTGA CGCTGCTGCC GGAAATGGCC CACGCCAGCC TGCGTGCGCA TCAGGACGAA
CTACGTAATC AATGGCAGGC ACCCTGGCAA GCGGCTGGCC AATGGCAGGC CTTCGTTGCC
ACCGGTGCGC AAGATCTGGA CCTCGACGGG GGGCGTACTT CTGCCGACGC TGACGGGCGC
GGCTACAACC TCACGCTGGG TGGCAGCTAC CGGCTCAACG ACACCTGGCG CGTAGGGCTT
GCCGGCGGTA TCTATCGCCA GAAACTGGAG GCAGGAGAAC AAGACTCGGA CTACAAGCTG
GACAGCTACC TGGCCAGTGC CTTCGCCCAG TTTCGTAAGG ACCGCTGGTG GGCCGACGCA
GCGCTGAGTG CTGGGCACCT GGATTACCAG GACCTCAAGC GCACCTTCGC CCTGGGCGTG
AATGACCGAA GTGAGAAAGG TGATACTGAC GGCGAAGCCT GGGCTGTGAC CGGCCGACTG
GGATACAACC TGGCAGCCGA TAGCAGTCGC TGGCAGCTGG CGCCGTTCAT CAGCGCCGAC
TACGCGCGGG TGAAGGTGGA CGGTTATGAC GAGAAGAGCG GACGTTCGAC GGCACTGGGC
TTCGATGACC AGGAACGCAC TTCGCGTCGT TTGGGTCTAG GGTTGCAGGG CAGCGTGCAG
GTACTGGCCA ACACCAGGCT GTTTGCCGAG GTGGCGCAGG AGCATGAGTT CGAGGATGAC
CAACAGGATG TGACGATGCA CCTGACGACA CTGCCAGCCA ATGACTTCAC GCTAACCGGG
TACACACCGC AGAGCAATCT GACACGCGCC AGCCTTGGGC TGAGCCATGA GCTCGCAGCG
GGGGTGCAAC TGCGCGGGAA CTACAACTGG CGCAAGAGCG ATGAGTTGAC CCAGCAAGGC
ATAAGCCTGG GCGTCAGCGT CGACTTTTAA
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| Protein sequence | MRKAPLLRFT LATLALACSQ AFAAPSPYST MIVFGDSLSD AGQFPDLTGG TAGMRFTNRD
ENGNFAPVSP MILGARLGVN PDELNPSTSF GIRPDGNNWA VGGYTTQQIL DSITTTSETV
IPPGQPFAGL VLRDKPGYLA NGLRADPNAL YYLTGGGNDF LQGLVSSPAD AAAAGSRLAA
SAQALQQGGA RYIMVWLLPD LGQTPNFSGT PQQNALSQLS SVFNQSLVSQ LGQIDAEIIP
LNIPVLLNEA LASPTQFGLA SGQNLVGTCY SGNSCVENPL YGINGTTPDP TKLLFNDSVH
PTIAGQQLIA DYGYSILSAP WELTLLPEMA HASLRAHQDE LRNQWQAPWQ AAGQWQAFVA
TGAQDLDLDG GRTSADADGR GYNLTLGGSY RLNDTWRVGL AGGIYRQKLE AGEQDSDYKL
DSYLASAFAQ FRKDRWWADA ALSAGHLDYQ DLKRTFALGV NDRSEKGDTD GEAWAVTGRL
GYNLAADSSR WQLAPFISAD YARVKVDGYD EKSGRSTALG FDDQERTSRR LGLGLQGSVQ
VLANTRLFAE VAQEHEFEDD QQDVTMHLTT LPANDFTLTG YTPQSNLTRA SLGLSHELAA
GVQLRGNYNW RKSDELTQQG ISLGVSVDF
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