Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4781 |
Symbol | trpC |
ID | 6113770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5268824 |
End bp | 5269657 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641624592 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_001751626 |
Protein GI | 170723938 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.574175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTCC CGACGGTGCT GGAAAGGATA GTTGCCCGCA AGTTCCAGGA AGTGGCTGAG CGCAGCGCGC GCGTCAGCCT CGCCGAAATG GAGCACCTGG CCAAGGGGGC GGATGCCCCG CGCGGGTTTG CTAATGCCCT GATCGAGCAA GCCAAGCGCA AGCAGCCAGC GGTGATCGCC GAAATCAAGA AGGCCTCGCC GAGCAAGGGT GTCATCCGCG AGAACTTCGT GCCGTCGGAA ATTGCCGTCA GTTACGAAAA GGGCGGGGCG ACTTGCCTGT CGGTGCTGAC CGACGTGGAC TACTTCCAGG GTGCTGATGA GTATCTGCAA CAGGCACGCG CCGCCGTTTC GCTGCCGGTG ATCCGCAAGG ATTTCATGGT CGACCCTTAT CAGATCATCG AAGCACGCGC CTTGGGCGCA GACTGCGTGC TGCTGATCGT GTCGGCGCTC GACGACGTCA AGATGGCCGA GTTGGCCGCT ACCGCCAAGG AAGTCGGTCT CGACGTGCTG GTCGAGGTAC ATGACGGTGA CGAGTTGGAG CGTGCGTTGA AAACGCTTGA TACCCCGCTG GTGGGTGTCA ACAACCGTAA CCTGCATACC TTCGAAGTTA GCCTGGAAAC CACTCTCGAC CTTTTACCGC GCATCCCCCG CGATCGCCTG GCCATCACCG AGAGTGGCAT TCTCAACCGT GCCGATGTCG AGTTGATGGA AATCAATGAC GTTTATTCGT TCCTGGTGGG CGAGGCGTTC ATGCGGGCCG AGCAGCCGGG GTTGGAACTG CAGCGGTTGT TCTTCCCTGA ACAGGTGAAG AAGACTGTTC AGCAACTGGA CTAA
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Protein sequence | MSVPTVLERI VARKFQEVAE RSARVSLAEM EHLAKGADAP RGFANALIEQ AKRKQPAVIA EIKKASPSKG VIRENFVPSE IAVSYEKGGA TCLSVLTDVD YFQGADEYLQ QARAAVSLPV IRKDFMVDPY QIIEARALGA DCVLLIVSAL DDVKMAELAA TAKEVGLDVL VEVHDGDELE RALKTLDTPL VGVNNRNLHT FEVSLETTLD LLPRIPRDRL AITESGILNR ADVELMEIND VYSFLVGEAF MRAEQPGLEL QRLFFPEQVK KTVQQLD
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