| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4773 |
|---|
| Symbol | |
|---|
| ID | 6113762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5262809 |
|---|
| End bp | 5263765 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641624584 |
|---|
| Product | 2-nitropropane dioxygenase NPD |
|---|
| Protein accession | YP_001751618 |
|---|
| Protein GI | 170723930 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.944849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.189828 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTGC CTGCTTCGCT CGAACAACGC CTGCGCTTGC CCGTGGTGGC GGCGCCGATG
TTCCTGATCT CCAATCCCCA GCTGGTCCTG GCCTGCTGCG GCAACGGCGT GGTCGGCAGT
TTCCCCGCCC TGAACCAGCG CGACAGTGCC GGTTTCAAGG GCTGGCTCGA GGAGATCGAA
GCGGGCCTTG GGCAGCTGCA GGCGCCAGCC CCTTATGCGG TCAATCTTAT CGTCCACCCA
TCCAACCCGC GCCTGCAGGC TGACCTTGCC CTGTGTGTCG AGCATCAGGT GCCTATAGTC
ATCACCAGTC TTGGCGCGGT GAAGGAAGTC GTCGATGCCG TACACGGCTA TGGCGGCCTG
GTGTTCCATG ATGTGACCAC CCGGCGTCAC GCTGAGAAAG CTGCACAGGC CGGCGTCGAT
GGCCTGATCG CGGTGGCGGC AGGTGCAGGC GGGCATGCTG GCACCTGGAG CCCGTTCGCC
CTTGCGGCAG AAATCCGCCA GTTTTTCGAC AAGACACTGC TATTGGCCGG CTGCATCAAC
CACGGCCATG AAATACTCGC CGCCCAGTTG CTTGGCGCGG ACCTGGCCTA CATGGGTACT
CGCTTTATTG CCACCCGGGA GAGCCATGCC CAAGAGGCGT ATAAACAGAT GCTGCTCGGC
GCGCATGCAG CGGATATCGT CCATACCCCA GCGGTTTCCG GCATACCGGC AAGCTTTTTG
CGCCAGAGCC TTGAACAGGC CGGGTATGAC ATGGCCGTAG TGAAGGCCGG CCAGGAGCAG
GGCAAACTCA AGCCGATCGA TGATGAAGCC AAGGCCTGGA AGACAGTATG GTCTGCCGGG
CAAGGCGTCG GAGAAATCCA TGACTTGCCC GGCGCCGCCG CACTGATCGA GCGCCTGCAC
GGCGAATACA GAGCAGCCCT GGAGCGCAGC CAGGCGTTAC GCGCCAAGGC CTTGTAG
|
|---|
| Protein sequence | MSLPASLEQR LRLPVVAAPM FLISNPQLVL ACCGNGVVGS FPALNQRDSA GFKGWLEEIE
AGLGQLQAPA PYAVNLIVHP SNPRLQADLA LCVEHQVPIV ITSLGAVKEV VDAVHGYGGL
VFHDVTTRRH AEKAAQAGVD GLIAVAAGAG GHAGTWSPFA LAAEIRQFFD KTLLLAGCIN
HGHEILAAQL LGADLAYMGT RFIATRESHA QEAYKQMLLG AHAADIVHTP AVSGIPASFL
RQSLEQAGYD MAVVKAGQEQ GKLKPIDDEA KAWKTVWSAG QGVGEIHDLP GAAALIERLH
GEYRAALERS QALRAKAL
|
|---|
| |