| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4768 |
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| Symbol | |
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| ID | 6113757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5258107 |
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| End bp | 5259525 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624579 |
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| Product | peptidase M23B |
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| Protein accession | YP_001751613 |
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| Protein GI | 170723925 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases
[COG3061] Cell envelope opacity-associated protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000282967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.90661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG AAACGCCTAA AGCGCCACCG CTTTATCCGA AAAGCCATCT GCTGGCCGCC
AGCGGCATAG CCGCCCTGCT CAGCCTGGCT CTGCTGGTAT TCCCATCCAG CGAAGTCGAA
GCCAAGAAGA CCACCCTCAG CCTCGAGCTG GAAAGCCCGT CAGAGCAACT GAAGGATGAG
TCCGGCGCCG CGCCGCTGGT GCAGACCGAA GCCGATCAAG GCTCGCCGTT CGCACAGATC
GAAGGTGCCG ATTCCAAAAC CGAACAAGCT ACTCAAGAGC TTCCGCCCCT AGAGCAACAA
CCAGAGGCCA AGGAGCCTGG GCATCGCGAA GTCACGGTGG CGCGAGGCGA TACATTGTCC
ACCCTGTTCG CGAAAGTCGG TCTGCCAGCC AATGCGGTGC ACGACCTGCT GGCCAGCAGC
AAGCAGGCCA AGCAGTTCAG CCAACTCAAG CATGGCCAGG TACTGCAATT CGAGCTCGAC
AACGACGGCC AACTGGCCAG CCTGCAAAGC AAGGTCAGTA CCCTCGAGAC CATCCGCCTA
ACAAAGACCG CCAAGGGCTA CAGTTTCGAC CGTGAAATCA GCAAGCCGGT GGTACGCACT
GCCTACGCCC ATGGCGTGAT CAAAAGCTCG CTGTCTGCCT CGGCCCAGCG TGCCGGCCTG
TCACACAGTC TGACCATGGA CATGGCCAAG GTACTGGGCT ACGACATCGA TTTCGCACAG
GACATCCGTC AGGGTGACGA ATTCGACGTG GTCTACGAGC AGAAGGTCAT GGATGGCAAG
GTGATTGGTA CTGGCAACAT CCTGTCCGCC CGCTTCACCA ACCGCGGCAA GACCTACACT
GCGGTGCGCT ACACCAACAA GCAGGGCAAC ACCAGCTACT ACACAGCCGA CGGCAACAGC
CTGCGCAAGG CGTTTATCCG TACCCCTGTG GACTTTGCCC GTATCAGCTC GCGGTTTTCC
GCTGGCCGCA AGCACCCGAT TCTGAACAAG ATCCGCGCGC ACAAGGGCGT CGACTATGCC
GCACCACGCG GGACACCGAT CAAGGCGGCC GGTGACGGTC GCATCGAGCT GGCCGGCCGT
CGCGGTGGGT ACGGCAACAC AGTGATCATC GCCCACGGCA ACAGATACAA GACCCTCTAC
GGGCACATGC AGGGCTTCGC CAAAGGCATC AAGACCGGCA GCAGCGTGAA ACAGGGGCAG
ATTATCGGCT ATATCGGTAC CACCGGCCTG TCTACAGGCC CGCACCTGCA CTACGAGTTC
CAGGTCAACG GCGTCCACGT CGATCCGCTG AGCCAGAAAG TACCGATGTC AGACCCGATC
GCCAAGGCTG AACGCCAGCG GTTCTTGCAG CAGAGCAAGC CACTGATCGC GCGCATGGAT
CAGGAAAAGG CCACCATGCT CGCAGCGAAC AAGCGCTGA
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| Protein sequence | MTDETPKAPP LYPKSHLLAA SGIAALLSLA LLVFPSSEVE AKKTTLSLEL ESPSEQLKDE
SGAAPLVQTE ADQGSPFAQI EGADSKTEQA TQELPPLEQQ PEAKEPGHRE VTVARGDTLS
TLFAKVGLPA NAVHDLLASS KQAKQFSQLK HGQVLQFELD NDGQLASLQS KVSTLETIRL
TKTAKGYSFD REISKPVVRT AYAHGVIKSS LSASAQRAGL SHSLTMDMAK VLGYDIDFAQ
DIRQGDEFDV VYEQKVMDGK VIGTGNILSA RFTNRGKTYT AVRYTNKQGN TSYYTADGNS
LRKAFIRTPV DFARISSRFS AGRKHPILNK IRAHKGVDYA APRGTPIKAA GDGRIELAGR
RGGYGNTVII AHGNRYKTLY GHMQGFAKGI KTGSSVKQGQ IIGYIGTTGL STGPHLHYEF
QVNGVHVDPL SQKVPMSDPI AKAERQRFLQ QSKPLIARMD QEKATMLAAN KR
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