Gene PputW619_4766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4766 
Symbol 
ID6113752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5250003 
End bp5250968 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content56% 
IMG OID641624574 
Productbiotin--protein ligase 
Protein accessionYP_001751611 
Protein GI170723923 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0199355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.789599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGT TGTTGAATCT CCTCAAGGAT GGCCGGTTCC ATTCCGGAGA AGCCTTGGGT 
GCAGCCCTCG GGGTGAGCCG CAGCGCCGTT TGGAAGCAGC TGCAGCATCT GGAGAGTGAG
CTAAATCTCA CCATTCATAA GGTTCGCGGA CGTGGCTATC AGCTAGCGGC GCCCCTGGCC
TTGCTCGAAG CGAAGGCAAT TGCCGAATAT GCTGATGCTG ATGCTGAGCA ATGGCCAATG
TTCATCCACG AAACCATCGA CTCTACCAAT GCTGAAGGGC TCCGGCTTGC AGGGCAGGGG
CAAGCTGCTC CATTTCTGGT GCTTGCCGAG CGTCAGAGTG CTGGGCGTGG CCGTCGTGGT
CGTCAGTGGG TAAGTCCTTT CGCGGAAAAC CTTTATTACA GTCTAGTGTT ACGTGTCGAA
GGCGGTATGC GTCAGCTCGA AGGGCTGAGT CTGGTGGTCG GCTTGGCGGT AATGCGCACC
TTGGAAGGCA TCGGTGTTAA GGAAGTCGGG CTCAAGTGGC CTAATGATGT ACTTGTGCGT
GGGCAAAAAA TCGCCGGCAT CCTGCTTGAG TTGGTCGGTG ATCCGGCAGA CGTCTGTCAC
GTTGTTCTTG GCATTGGCGT CAATGTGAAT ATGCAGGTCA ACGTCCATGT AGATCAGCAG
TGGACCTCCA TACGACGTGA GGTTGGCTCT CCCATCGATC GTAATCGGCT GGTCGCAATG
CTCAGCCAGC AGCTGCAGCA TGAATTGGCG CGTCACCGAC GTTATGGTTT TGCCGCATTT
CAGGAAGAAT GGGAGCAAGC ACATCTATGG CAGGGGCGTA ATGTGTCGCT TGTTGCCGGC
AGTACCCAGA TCGATGGGGT AGTGCTCGGA GTGGACGGGC AGGGTGGCTT GCGCCTGGAG
ATCGATGGCG TGGAGAAGAG CTTCAGTGGT GGTGAGCTCA GTTTGAGGTT GCGTGATGAT
TCTTGA
 
Protein sequence
MLKLLNLLKD GRFHSGEALG AALGVSRSAV WKQLQHLESE LNLTIHKVRG RGYQLAAPLA 
LLEAKAIAEY ADADAEQWPM FIHETIDSTN AEGLRLAGQG QAAPFLVLAE RQSAGRGRRG
RQWVSPFAEN LYYSLVLRVE GGMRQLEGLS LVVGLAVMRT LEGIGVKEVG LKWPNDVLVR
GQKIAGILLE LVGDPADVCH VVLGIGVNVN MQVNVHVDQQ WTSIRREVGS PIDRNRLVAM
LSQQLQHELA RHRRYGFAAF QEEWEQAHLW QGRNVSLVAG STQIDGVVLG VDGQGGLRLE
IDGVEKSFSG GELSLRLRDD S