| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4760 |
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| Symbol | rplK |
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| ID | 6113742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5245483 |
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| End bp | 5245914 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641624564 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001751605 |
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| Protein GI | 170723917 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000974914 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA AGATTCAGGC TTACATCAAG CTGCAAGTTA AGGCCGGCCA GGCCAACCCA
AGCCCACCCG TTGGTCCAGC ACTGGGCCAA CACGGTGTGA ACATCATGGA ATTCTGCAAG
GCCTTCAACG CCCGTACTCA GGGTCAAGAA GCCGGCCTGC CGACTCCTGT GATCATCACT
GTTTACAGTG ACCGTAGCTT CACTTTCGAA ACCAAGAGCA CCCCTGCCTC GGTTCTGCTG
AAGAAAGCTG CTGGCCTGAC CAGTGGTTCG GCTCGCCCGA ACACCGTCAA AGTCGGTACC
GTGACCCGTG CTCAGCTGGA AGATATCGCC AAGGCTAAAC AGGCTGATCT GACCGCTGCT
GACCTGGACG CTGCTGTACG CACCATCGCT GGCTCTGCCC GCAGCATGGG CCTGAACGTG
GAGGGTGTGT AA
|
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| Protein sequence | MAKKIQAYIK LQVKAGQANP SPPVGPALGQ HGVNIMEFCK AFNARTQGQE AGLPTPVIIT
VYSDRSFTFE TKSTPASVLL KKAAGLTSGS ARPNTVKVGT VTRAQLEDIA KAKQADLTAA
DLDAAVRTIA GSARSMGLNV EGV
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