Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4758 |
Symbol | rplJ |
ID | 6113740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5244091 |
End bp | 5244591 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641624562 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_001751603 |
Protein GI | 170723915 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00494482 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAATTA AACTCGAAGA CAAGAAAGCC ATCGTCGCTG AAGTCAACGA GGCTGCCAAA GTCGCTCTGT CCGCTGTCGT GGCCGATGCC CGTGGTGTGA CTGTAAGCGC AATGACCGGA CTCCGTAAAG AGGCCCGCGA AGCTGGCGTA TACGTACGTG TCGTACGTAA CACCCTGCTC AAGCGCGCAG TTGAAGGCAC CGAGTATTCG ATCCTCAACG ACGCGTTCAA AGGCCCGACC CTGATTGCTT TCTCCAACGA ACACCCGGGC GCTGCTGCTC GTCTGTTCAA GGAGTTCGCT AAGGGTCAGG ACAAGTTCGA GATCAAGGCA GCTGCGTTTG ACGGCAATTT CATTGCCGCC AACCAGATCG ATGTACTGGC TACCTTGCCG ACCCGTGACG AAGCTATCGC ACGTCTGATG AGCGTCATTC AAGGCGCCAC CAGCAAGCTG GCTCGTACTC TGGCGGCCGT TCGCGACCAG AAAGAAGCTG CTGCTGCCTA A
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Protein sequence | MAIKLEDKKA IVAEVNEAAK VALSAVVADA RGVTVSAMTG LRKEAREAGV YVRVVRNTLL KRAVEGTEYS ILNDAFKGPT LIAFSNEHPG AAARLFKEFA KGQDKFEIKA AAFDGNFIAA NQIDVLATLP TRDEAIARLM SVIQGATSKL ARTLAAVRDQ KEAAAA
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