Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4746 |
Symbol | rplB |
ID | 6113728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5227614 |
End bp | 5228438 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641624550 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001751591 |
Protein GI | 170723903 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00153291 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCG TTAAATGCAA ACCGACTTCC CCTGGCCGCC GTTTCGTGGT CAAGGTGGTC AACCAGGAGC TGCATAAAGG CGCTCCTCAC GCACCGCTGC TCGAGAAGAA ATCGAAGTCT GGTGGTCGTA ACAACAATGG CCGCATCACC ACTCGTCACG TTGGTGGTGG TCATAAGCAG CATTACCGTC TGGTCGACTT CCGTCGCAAC GACAAAGATG GCATCCCAGC CACTGTCGAG CGTATCGAAT ACGATCCAAA CCGTACTGCT CACATCGCCC TGCTGTGCTA CGCAGACGGT GAGCGTCGCT ACATCATCGC CCCTAAAGGC GTAAGTGCTG GCGACCAGCT GATCGCAGGT GCTCTGGCCC CAATCAAGGC CGGTAACTCC CTGCAGCTGC GCAACATCCC AGTAGGTAGC ACCATTCACG GCATCGAACT GAAGCCGGGT AAAGGTGCTC AGATCGCTCG TTCCGCTGGT GCTTCGGCTC AGCTGATCGC TCGTGAAGGC GTCTACGTGA CTCTGCGTCT GCGTTCCGGT GAGATGCGTA AAGTACTGGC TGAGTGCCGT GCGACCCTGG GCGAAGTCTC GAACTCCGAG CACAGCCTGC GCTCGCTGGG TAAAGCTGGT GCCAAACGCT GGCGCGGCGT TCGCCCAACC GTTCGTGGTG TTGCCATGAA CCCGGTTGAC CACCCACATG GTGGTGGTGA AGGTCGTACC TCCGGTGGTC GTCATCCGGT ATCGCCATGG GGCTTCCCAA CCAAGGGTGC TAAAACCCGT GGTAATAAGC GTACCGACAA CATGATCGTC CGTCGTCGCA AGTAA
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Protein sequence | MAIVKCKPTS PGRRFVVKVV NQELHKGAPH APLLEKKSKS GGRNNNGRIT TRHVGGGHKQ HYRLVDFRRN DKDGIPATVE RIEYDPNRTA HIALLCYADG ERRYIIAPKG VSAGDQLIAG ALAPIKAGNS LQLRNIPVGS TIHGIELKPG KGAQIARSAG ASAQLIAREG VYVTLRLRSG EMRKVLAECR ATLGEVSNSE HSLRSLGKAG AKRWRGVRPT VRGVAMNPVD HPHGGGEGRT SGGRHPVSPW GFPTKGAKTR GNKRTDNMIV RRRK
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