Gene PputW619_4732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4732 
SymbolrpsE 
ID6113714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5221783 
End bp5222283 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID641624536 
Product30S ribosomal protein S5 
Protein accessionYP_001751577 
Protein GI170723889 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000128716 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.628759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATA ACGATCAAAA GCGCGACGAA GGCTACATCG AGAAGCTGGT TCAAGTTAAC 
CGCGTAGCTA AAACCGTTAA AGGCGGCCGT ATCTTCACCT TCACCGCGCT GACCGTGGTT
GGTGACGGTA AAGGTCGCGT CGGCTTCGGC CGTGGCAAAT CGCGCGAAGT ACCTGCCGCG
ATTCAGAAAG CCATGGAAGC TGCTCGTCGC AACATGATCC AGGTTGACCT GAAGGGCACC
ACCCTGCAGT ACGCCACCAA GGCCGCCCAC GGCGCCTCGA AGGTTTACAT GCAGCCTGCT
TCGGAAGGTA CCGGTATCAT CGCCGGCGGC GCCATGCGTG CTGTCCTGGA AGTTGCTGGT
GTTCAGAACG TCCTGGCCAA GTGCTACGGT TCGACCAACC CAGTGAACGT GGTTTACGCC
ACCTTCAAGG GTCTGAAAGC CATGCAATCT CCTGAGTCCA TTGCTGCCAA GCGCGGCAAG
AGCGTTGAGG AGATCTTCTG A
 
Protein sequence
MANNDQKRDE GYIEKLVQVN RVAKTVKGGR IFTFTALTVV GDGKGRVGFG RGKSREVPAA 
IQKAMEAARR NMIQVDLKGT TLQYATKAAH GASKVYMQPA SEGTGIIAGG AMRAVLEVAG
VQNVLAKCYG STNPVNVVYA TFKGLKAMQS PESIAAKRGK SVEEIF