Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4732 |
Symbol | rpsE |
ID | 6113714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5221783 |
End bp | 5222283 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641624536 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001751577 |
Protein GI | 170723889 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000128716 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.628759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA ACGATCAAAA GCGCGACGAA GGCTACATCG AGAAGCTGGT TCAAGTTAAC CGCGTAGCTA AAACCGTTAA AGGCGGCCGT ATCTTCACCT TCACCGCGCT GACCGTGGTT GGTGACGGTA AAGGTCGCGT CGGCTTCGGC CGTGGCAAAT CGCGCGAAGT ACCTGCCGCG ATTCAGAAAG CCATGGAAGC TGCTCGTCGC AACATGATCC AGGTTGACCT GAAGGGCACC ACCCTGCAGT ACGCCACCAA GGCCGCCCAC GGCGCCTCGA AGGTTTACAT GCAGCCTGCT TCGGAAGGTA CCGGTATCAT CGCCGGCGGC GCCATGCGTG CTGTCCTGGA AGTTGCTGGT GTTCAGAACG TCCTGGCCAA GTGCTACGGT TCGACCAACC CAGTGAACGT GGTTTACGCC ACCTTCAAGG GTCTGAAAGC CATGCAATCT CCTGAGTCCA TTGCTGCCAA GCGCGGCAAG AGCGTTGAGG AGATCTTCTG A
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Protein sequence | MANNDQKRDE GYIEKLVQVN RVAKTVKGGR IFTFTALTVV GDGKGRVGFG RGKSREVPAA IQKAMEAARR NMIQVDLKGT TLQYATKAAH GASKVYMQPA SEGTGIIAGG AMRAVLEVAG VQNVLAKCYG STNPVNVVYA TFKGLKAMQS PESIAAKRGK SVEEIF
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