| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4724 |
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| Symbol | |
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| ID | 6113706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5217133 |
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| End bp | 5218134 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641624528 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001751569 |
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| Protein GI | 170723881 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.712838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.227137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTT CGGTAAATGA GTTCCTGACT CCCCGCCATA TTGATGTGCA GGTAGTCAGT
CCGACCCGCG CCAAGATCAC GCTCGAGCCT CTCGAGCGTG GCTTCGGCCA TACCCTGGGC
AACGCGCTGC GCCGCATCTT GTTGTCCTCC ATGCCTGGCT GTGCAGTAGT CGAGGCCGAG
ATCGATGGCG TACTCCATGA GTACTCCGCG ATCGAAGGTG TACAGGAAGA CGTAATTGAA
ATCCTGTTGA ACCTTAAAGG TCTGGCTATC AAACTGCACG GTCGTGACGA AGTTACGCTG
ACCTTGTCGA AAAAGGGTTC GGGGGTGGTT ACCGCTGCCG ATATTCAGCT GGATCACGAT
GTCGAGATCG TCAACCCCGA TCACGTAATC GCGAACCTGG CGTCCAACGG CGCCCTGAAC
ATGAAGCTCA CTGTAGCTCG TGGTCGCGGT TACGAGCCGG CTGACTCCCG TCAAACCGAC
GAAGACGAAA GCCGTAGCAT TGGCCGTCTG CAGCTGGACG CTTCGTTCAG CCCGGTGCGT
CGTATCGCCT ATGTGGTCGA GAACGCCCGT GTTGAACAGC GTACCAACCT GGACAAGCTG
GTCATTGATC TGGAAACCAA CGGCACCCTG GACCCTGAAG AGGCTATCCG CCGCGCTGCG
ACCATCCTGC AACAGCAGCT GGCCGCGTTC GTCGACCTCA AAGGTGACAG CGAGCCTGTC
GTAGTCGAGC AGGAAGACGA GATCGATCCG ATCCTGCTAC GTCCGGTTGA CGACCTGGAA
CTGACTGTAC GTTCGGCCAA CTGCCTCAAG GCGGAGAACA TCTACTACAT CGGCGACCTG
ATTCAGCGTA CCGAAGTAGA GCTGTTGAAG ACTCCTAACC TGGGCAAGAA GTCCCTGACT
GAAATCAAGG ACGTGCTGGC CTCTCGTGGT CTGTCTCTCG GCATGCGCCT CGACAACTGG
CCGCCTGCAA GTCTTAAGAA AGACGACAAG GCGACCGCCT GA
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| Protein sequence | MQISVNEFLT PRHIDVQVVS PTRAKITLEP LERGFGHTLG NALRRILLSS MPGCAVVEAE
IDGVLHEYSA IEGVQEDVIE ILLNLKGLAI KLHGRDEVTL TLSKKGSGVV TAADIQLDHD
VEIVNPDHVI ANLASNGALN MKLTVARGRG YEPADSRQTD EDESRSIGRL QLDASFSPVR
RIAYVVENAR VEQRTNLDKL VIDLETNGTL DPEEAIRRAA TILQQQLAAF VDLKGDSEPV
VVEQEDEIDP ILLRPVDDLE LTVRSANCLK AENIYYIGDL IQRTEVELLK TPNLGKKSLT
EIKDVLASRG LSLGMRLDNW PPASLKKDDK ATA
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