| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4711 |
|---|
| Symbol | |
|---|
| ID | 6113693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5201788 |
|---|
| End bp | 5202405 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641624516 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001751557 |
|---|
| Protein GI | 170723869 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.754787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACG CGTTGAATTC AGTGCCCAAG GGCTTCGACA TCATCGAACG GGCCAATTGC
TTCCAGGGCT TCTACAAGCT CGACAAGCTT CGCCTGCGCC ATGAGCTGTT TGCCGGCGGC
ATGGGCCGCG AGATCAGCCG CGAACTGTTC GTGCGTCATG ATGCCGTTTG CGTGCTGCCT
TACGATCCAC TGCGCGATGA AGTAGTGTTG ATCGAGCAGT TTCGCGTCGG CGCGCTGGAT
AAAGTCGACA ATCCCTGGCT GATCGAGATG GTCGCCGGCC TGATCGACAA GGATGAACAG
CCTGAAGAGG TCGCTCATCG TGAAGCCGAA GAAGAAGCCG GTCTGACCTT CAGCGCCCTG
TGGCCGATGA CCCGTTATTT CCCCTCGCCC GGTGGCAGTG ATGAATACGT GCACCTGTTC
CTTGGCCGCT GCAGCAGCGA AGGCGCCGGG GGGCTGCACG GCCTGGAAGA AGAGGGCGAG
GATATCCGCG TGCGGGTCTG GTCGTTCGAA GATGCCTTGC AGGCTGTGCG CGATGGGCGT
ATCTGCAATG CGGCGACGAT CATTGGCCTG CAATGGCTGG CGCTCAACAG AGATGAAGTA
CGAGGTATGT GGAAGTGA
|
|---|
| Protein sequence | MSDALNSVPK GFDIIERANC FQGFYKLDKL RLRHELFAGG MGREISRELF VRHDAVCVLP
YDPLRDEVVL IEQFRVGALD KVDNPWLIEM VAGLIDKDEQ PEEVAHREAE EEAGLTFSAL
WPMTRYFPSP GGSDEYVHLF LGRCSSEGAG GLHGLEEEGE DIRVRVWSFE DALQAVRDGR
ICNAATIIGL QWLALNRDEV RGMWK
|
|---|
| |