| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4694 |
|---|
| Symbol | |
|---|
| ID | 6113676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5183242 |
|---|
| End bp | 5184273 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641624499 |
|---|
| Product | ribosome-associated GTPase |
|---|
| Protein accession | YP_001751540 |
|---|
| Protein GI | 170723852 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1162] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC GCCAACTCAA TCGCCGCCAA AACTGGCGTA TCGAAAAGAT CCAGAACGAA
CGCGCCGCTC GCGCCGCCAA ACGCGAGCAG CATGCGCTGC AGGAGCTGGA AGGTGGCGAC
CTGGGGCCGG AGCAACTGGG TCTGGTGATC GCTCACTTCG GTGTGCAGGT CGAGGTGGAG
GCCCAGGACG GCGAGTTTGC AGGCCAGGTA TTCCGCTGCC ACCTGCGCGC TAACCTGCCG
GCGCTGGTCA CCGGTGACCG CGTGGTCTGG CGTGCCGGCA ACCAGGGCAT TGGCGTAATC
GTCGCGCAGA TGCCGCGCAG CACCGAGCTG TGCCGGCCCA ACAATCACGG TCAGCTCAAG
CCGGTTGCCG CCAACGTCGA CCTCATCGTG ATCGTCTTCG CACCAGCGCC CGAGCCGCAC
CCGAATCTGA TCGACCGTTA CCTGGTCGCT GCCGAGCACG CGGGCATCCG CCCACTGCTG
CTACTGAACA AAGCCGACCT GATCAACGAC GAGAACGGCC CGGCCCTGCA TGCCTTGCTC
GAGGTATACC GCGACCTAGG CTACCCGTTG CTGGAGGTCT CCGCCCACCA TGGTGACGGC
ATGCAGCGCC TGCAGCAGAT GCTGGACGGC CATATCAGCG TGTTCGTCGG GCAGTCGGGT
GTGGGCAAGT CATCTCTGGT CAACAGCCTG CTGCCTGCTG CCGACACCCG GGTCGGTGAC
CTGTCCGAAT GGTCGGGCCA AGGCACCCAC ACCACCACCA CCGCGCGCCT TTACCACTTC
CCCAATGGCG GCGACCTGAT CGACTCGCCA GGCATCCGAG AGTTCGGCCT TGGCCATGTC
AGTCGTGATG ATGTGGAGGA TGGCTTCATC GAGTTCCGCG ACCTGTTCGG CACCTGCCGC
TTTCGCGATT GCAAGCATGA TCGCGAGCCA GGCTGTGCGC TGCTCGAGGC ACTGGAAGAC
GGCCGTATAA AGCAGCAGCG CATGAACAGC TACCGCTCGA TCATTGCCAG CCTGCCGGAA
GACAGCTACT GA
|
|---|
| Protein sequence | MAKRQLNRRQ NWRIEKIQNE RAARAAKREQ HALQELEGGD LGPEQLGLVI AHFGVQVEVE
AQDGEFAGQV FRCHLRANLP ALVTGDRVVW RAGNQGIGVI VAQMPRSTEL CRPNNHGQLK
PVAANVDLIV IVFAPAPEPH PNLIDRYLVA AEHAGIRPLL LLNKADLIND ENGPALHALL
EVYRDLGYPL LEVSAHHGDG MQRLQQMLDG HISVFVGQSG VGKSSLVNSL LPAADTRVGD
LSEWSGQGTH TTTTARLYHF PNGGDLIDSP GIREFGLGHV SRDDVEDGFI EFRDLFGTCR
FRDCKHDREP GCALLEALED GRIKQQRMNS YRSIIASLPE DSY
|
|---|
| |