Gene PputW619_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4688 
Symbol 
ID6113670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5177909 
End bp5179342 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content63% 
IMG OID641624493 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001751534 
Protein GI170723846 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.802168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATAC GCGCACTGGT CGCTGTCGTT GGTCTGCTGC TGACAGCGGT GACTGTTGAC 
GCTCTGGCCG TCACTCAAGT CAAGAGCATG CGCCTGTGGC GCGCGCCGGA CAACACGCGG
CTGGTCTTCG ACCTGTCTGG CCCCGTGCAG CATAGCGTCT TCACCCTCAG CGCACCCGAT
CGCCTGGTCA TCGATATCAA TGGCGCGACG CTGGGCGCGC CGCTGAACGT TTCCACCTCG
AACACGCCGA TCAGCAGCGT GCGCTCCGCC CAACGTACGC CTACCGATCT GCGCGTGGTG
GTCGACCTGA AAAAGTCGGT CACGCCCAAA AGCTTCACCC TGGCACCCAA CGCCCAGTAC
GGCAACCGTC TGGTGGTCGA CCTGTATGAC CAGGAAGCCG ATGCCATCGC CGCCACGGCG
CCTGCTGCAC CGCCAACGCC TGTGCAAACC CCGGCGACCA CCCCAGCGGT GCCGGTAAGC
CCGGCCCAGC CGGCGATCAA ACTGCCACCT GTACCCAGCG GCAAGCGCGA CATCGTGGTC
GCCATCGACG CCGGTCATGG CGGTGAGGAT CCGGGTGCGT CGGGGTCGCG TGGCCAGCAT
GAGAAAGACA TCGTGCTGCA AATCGCCAAG GAGCTGCAGC GTCAGATCAA TACCGAGAAG
GGCTACCGTG CCGAACTGAC CCGCACCGGT GACTACTTCA TTCCGCTGCG CAAACGTACC
GAGATTGCCC GCAAGAAAGG TGCTGACCTG TTCATCTCGA TCCACGCTGA CGCTGCACCG
TCGCGGGCCG CCTTTGGCGC CTCGGTGTTC GCCCTGTCCG ACCGTGGCGC CACTTCCGAG
ACCGCCCGCT GGCTGGCCGA CGCGGAAAAC CGCTCCGACC TGATCGGTGG TGCTGGTAAC
GTCAGCCTCG ACGACAAAGA CCGCATGCTC GCAGGCGTGT TGCTCGACTT GTCGATGACC
GCAACGCTCA GTTCCAGCCT CAACGTCGGG CAAAAAGTGC TGGGCAACAT GGGGCGCATC
ACTTCGCTGC ACAAGCAGCG CGTGGAGCAA GCTGGTTTCA TGGTACTGAA GTCGCCTGAC
ATCCCGTCGA TCCTGGTCGA AACGGGGTTC ATCTCCAACA ACAACGAAGC CGCCAAACTG
GCAACGCGCA GCCATCAGCA GGCACTGGCC CGCTCGATCC ATACCGGTGT GCGCCAATAC
TTCCAGCAGA ACCCGCCGCC TGGTACTTAC ATCGCCTGGA TGCGCGATAG CGGCAAGATC
GCCCAAGGGC CACGTGAACA CACGGTACGC CCGGGCGAGA CCCTGGCGAT GCTTGCCGTG
CGCTATCAGG TCAGCGTGGC TAGCCTGCGC AGCACCAACA GCCTCAAGAG CGATGAGCTG
AAGGTCGGCC AGCACCTCAA TATTCCCTCA ACGACCCTGG CCTCGCAGCA ATGA
 
Protein sequence
MRIRALVAVV GLLLTAVTVD ALAVTQVKSM RLWRAPDNTR LVFDLSGPVQ HSVFTLSAPD 
RLVIDINGAT LGAPLNVSTS NTPISSVRSA QRTPTDLRVV VDLKKSVTPK SFTLAPNAQY
GNRLVVDLYD QEADAIAATA PAAPPTPVQT PATTPAVPVS PAQPAIKLPP VPSGKRDIVV
AIDAGHGGED PGASGSRGQH EKDIVLQIAK ELQRQINTEK GYRAELTRTG DYFIPLRKRT
EIARKKGADL FISIHADAAP SRAAFGASVF ALSDRGATSE TARWLADAEN RSDLIGGAGN
VSLDDKDRML AGVLLDLSMT ATLSSSLNVG QKVLGNMGRI TSLHKQRVEQ AGFMVLKSPD
IPSILVETGF ISNNNEAAKL ATRSHQQALA RSIHTGVRQY FQQNPPPGTY IAWMRDSGKI
AQGPREHTVR PGETLAMLAV RYQVSVASLR STNSLKSDEL KVGQHLNIPS TTLASQQ