Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4658 |
Symbol | |
ID | 6113639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5143687 |
End bp | 5144601 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641624464 |
Product | inner-membrane translocator |
Protein accession | YP_001751507 |
Protein GI | 170723819 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0026431 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGGTA TTTTCCTGCA GCAACTGGTC AACGGCCTGA CCCTCGGGTC GGTCTATGGC CTGATCGCCA TCGGCTACAC AATGGTCTAT GGCATCATCG GCATGATCAA CTTCGCGCAC GGCGAGGTGT ATATGATTTC CGCGTACCTC GCGGCAATCA GCCTGGCATT GCTGGCTTAT TTCGGTATCG AGTCGTTCCC CCTGCTGATG TTGGGCACCT TGTTGTTCAC CATCGTCGTC ACGGGTGTGT ATGGCTTCAC CATTGAACGC ATCGCCTACA AACCCCTGCG CAACTCCACC CGCCTGGCAC CGCTGATCAG TGCCATCGGC ATCTCGCTGA TCCTGCAAAA CTATGCGCAG ATTAGCCAGG GCGCCCGCCA GCAAGGCGTG CCGACCCTGC TCGAAGGCGC CTGGCGCGTC GAAGTGGGCA CTGGCTTCGT GCAACTGACC TACACCAAGA TCTTCATCCT GATTGCCGCA TTCGTCGGCA TGGGGCTGCT CACCTATGTG ATCAAGTACA CCAAGCTCGG CCGTATGTGC CGCGCTACCC AGCAAGACCG CAAGATGGCC TCGATCCTTG GCATCAACAC CGACCGGGTG ATCTCCTACG TGTTCGTCAT CGGCGCGGTG ATGGCTGCGC TTGCCGGTGT GCTGATCACC ATGAACTACG GCACCTTCGA CTTCTACGCC GGCTTCATCA TCGGCATCAA GGCATTCACC GCTGCGGTGC TCGGCGGCAT CGGCTCGCTG CCCGGCGCCA TGTTGGGCGG GATTATCCTG GGTATTTCCG AGTCGTTGTT CTCTGGCCTG ATCAACTCCG ACTACAAGGA CGTGTTCAGC TTCTCGCTGC TGGTGCTGAT CCTTATCTTC CGCCCACAAG GCCTGTTGGG TCGCCCGCTC GTGGCTAAGG TGTGA
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Protein sequence | MDGIFLQQLV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GEVYMISAYL AAISLALLAY FGIESFPLLM LGTLLFTIVV TGVYGFTIER IAYKPLRNST RLAPLISAIG ISLILQNYAQ ISQGARQQGV PTLLEGAWRV EVGTGFVQLT YTKIFILIAA FVGMGLLTYV IKYTKLGRMC RATQQDRKMA SILGINTDRV ISYVFVIGAV MAALAGVLIT MNYGTFDFYA GFIIGIKAFT AAVLGGIGSL PGAMLGGIIL GISESLFSGL INSDYKDVFS FSLLVLILIF RPQGLLGRPL VAKV
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