Gene PputW619_4654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4654 
Symbol 
ID6113635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5139423 
End bp5140190 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content61% 
IMG OID641624460 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001751503 
Protein GI170723815 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000309791 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00252207 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTCCA CCGTATTCAT CACTGGCGCG ACTTCCGGTT TTGGCGAGGC CACGGCTCGC 
CGCTTCGCCG ATGCCGGCTG GAAGCTGATT CTTACGGGCC GGCGCAAGGA TCGCCTGGAT
GCCCTGTGCG CCGAACTGTC GGCCAAGACC GAAGTGCATG GCCTGGTGCT CGATGTACGT
GACCGCAAGG CCATGGAGCA CGCCATTGGC AACCTGCCGG AGGGCTTTGA CAAGCTGCGC
GGGCTGGTCA ACAACGCAGG CCTTGCGCTG GGCGTCGATG CGGCGCAGAA CTGCAGCCTG
GACGACTGGG AAACCATGGT CGATACCAAC ATCAAGGGCC TGATGTACAC AACCCGTTTG
CTGCTGCCAC GCCTGATCGC CCACGGGCGT GGGGCGTCGA TTCTCAACGT GGGGTCGGTG
GCGGGCAACT ACCCATACCC GGGCAGCAAT GTTTATGGTG GTACCAAGGC GTTCGTCGGC
CAGTTCTCGC TGAGCCTGCG TTGTGACTTG CGTGGCACGG GTGTGCGTGT CAGCAACCTT
GAGCCAGGGC TGTGTGAAAG TGAGTTTTCG CTGGTGCGGT TCGGTGGGGA CCAGGCCAAG
TATGATGCCA CCTACGCCGG TGCCGAGCCT ATTCAGCCGC AGGATATCGC CGAGACCATC
TTCTGGATCC TCAACCAGCC GGCCCACATC AACATCAACA GCCTGGAACT TATGCCGGTG
AGCCAGGACT GGGCTGGGTT ATCGATTGAT CGTTCGGTGA AGGGCTGA
 
Protein sequence
MTSTVFITGA TSGFGEATAR RFADAGWKLI LTGRRKDRLD ALCAELSAKT EVHGLVLDVR 
DRKAMEHAIG NLPEGFDKLR GLVNNAGLAL GVDAAQNCSL DDWETMVDTN IKGLMYTTRL
LLPRLIAHGR GASILNVGSV AGNYPYPGSN VYGGTKAFVG QFSLSLRCDL RGTGVRVSNL
EPGLCESEFS LVRFGGDQAK YDATYAGAEP IQPQDIAETI FWILNQPAHI NINSLELMPV
SQDWAGLSID RSVKG