Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4654 |
Symbol | |
ID | 6113635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5139423 |
End bp | 5140190 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641624460 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001751503 |
Protein GI | 170723815 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000309791 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00252207 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGTCCA CCGTATTCAT CACTGGCGCG ACTTCCGGTT TTGGCGAGGC CACGGCTCGC CGCTTCGCCG ATGCCGGCTG GAAGCTGATT CTTACGGGCC GGCGCAAGGA TCGCCTGGAT GCCCTGTGCG CCGAACTGTC GGCCAAGACC GAAGTGCATG GCCTGGTGCT CGATGTACGT GACCGCAAGG CCATGGAGCA CGCCATTGGC AACCTGCCGG AGGGCTTTGA CAAGCTGCGC GGGCTGGTCA ACAACGCAGG CCTTGCGCTG GGCGTCGATG CGGCGCAGAA CTGCAGCCTG GACGACTGGG AAACCATGGT CGATACCAAC ATCAAGGGCC TGATGTACAC AACCCGTTTG CTGCTGCCAC GCCTGATCGC CCACGGGCGT GGGGCGTCGA TTCTCAACGT GGGGTCGGTG GCGGGCAACT ACCCATACCC GGGCAGCAAT GTTTATGGTG GTACCAAGGC GTTCGTCGGC CAGTTCTCGC TGAGCCTGCG TTGTGACTTG CGTGGCACGG GTGTGCGTGT CAGCAACCTT GAGCCAGGGC TGTGTGAAAG TGAGTTTTCG CTGGTGCGGT TCGGTGGGGA CCAGGCCAAG TATGATGCCA CCTACGCCGG TGCCGAGCCT ATTCAGCCGC AGGATATCGC CGAGACCATC TTCTGGATCC TCAACCAGCC GGCCCACATC AACATCAACA GCCTGGAACT TATGCCGGTG AGCCAGGACT GGGCTGGGTT ATCGATTGAT CGTTCGGTGA AGGGCTGA
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Protein sequence | MTSTVFITGA TSGFGEATAR RFADAGWKLI LTGRRKDRLD ALCAELSAKT EVHGLVLDVR DRKAMEHAIG NLPEGFDKLR GLVNNAGLAL GVDAAQNCSL DDWETMVDTN IKGLMYTTRL LLPRLIAHGR GASILNVGSV AGNYPYPGSN VYGGTKAFVG QFSLSLRCDL RGTGVRVSNL EPGLCESEFS LVRFGGDQAK YDATYAGAEP IQPQDIAETI FWILNQPAHI NINSLELMPV SQDWAGLSID RSVKG
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