| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4652 |
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| Symbol | |
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| ID | 6113633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5137543 |
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| End bp | 5138175 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641624458 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001751501 |
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| Protein GI | 170723813 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.104872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00491998 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCCGC GCGCCGAACA GAAGCTACAG ACCCGCCAGG CCCTGCTCGA TGCGGCCTGC
CAGCTCATGG AAAGTGGCCG TGGTTTCGGC AGCATCAGCC TGCGCGAAGT GGCCAAGGCC
GCCGGCATCG TGCCCACCGG GTTCTATCGG CACTTCCCCG ACATGGATGC CCTTGGCCTG
GCCCTGGTGG CCGAGGTCGA TGACACCTTC CGCCAGACCA TCCGCCTGGT GCGGCAGAAC
GAGTTCGAAC TGGGGGGTAT CACCGACGCC TCGGTACGCA TCTTCCTCGA CGTGGTAGCC
GCCCACCGGG CACAGTTCCT ATTCCTGGCC CGCGAGCAGT ACGGCGGCTC GCAGGCGGTG
CGCCAGGCCA TCGGCCGCCT GCGCCAAGGT ATCAGCAACG ACCTGGCCAC CGATCTTGCG
CGAATGAAAC GCTGGCAGCA CCTGAACGAT GCAGCGCTGG CGGTGATTGC CGACCTGGTG
GTGAAGACCG TGTTTGCCAC CCTGCCGGAA CTGATCGACA ACCCGGAGCA AGGTTATCCA
CAGGCCCTGA GCGCACGGGA CAAGATAACC CAGCAGTTAC GCTTCATCTT CGTCGGTGCA
CGGCATTGGC AGGGTCTGGG TAATCCGGGC TGA
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| Protein sequence | MLPRAEQKLQ TRQALLDAAC QLMESGRGFG SISLREVAKA AGIVPTGFYR HFPDMDALGL
ALVAEVDDTF RQTIRLVRQN EFELGGITDA SVRIFLDVVA AHRAQFLFLA REQYGGSQAV
RQAIGRLRQG ISNDLATDLA RMKRWQHLND AALAVIADLV VKTVFATLPE LIDNPEQGYP
QALSARDKIT QQLRFIFVGA RHWQGLGNPG
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