| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4636 |
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| Symbol | |
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| ID | 6113617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5122570 |
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| End bp | 5123427 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624442 |
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| Product | urea ABC transporter, ATP-binding protein UrtD |
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| Protein accession | YP_001751485 |
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| Protein GI | 170723797 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.880683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0525731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCG TGCCCCCAGT GCATCCGGAA TTCATGCTCG AACCGGTATT CGACAACCTT
GGCAGCGGCC GTGATGCCAT CGGCCTGGGC AGCCGCCGTG AAGCGGGGCT GGATACCCGT
CACGGTACGG TGCTGAGCCT GGAAGGCATC AGCGTCAGCT TCGATGGGTT CAAGGCACTC
AATGCCCTGA ACCTGTACAT AGGTGTTGGG GAATTGCGCT GCATCATCGG CCCCAACGGT
GCCGGCAAAA CCACCATGAT GGACGTGATT ACCGGCAAGA CGCGCCCCGA CACCGGCACA
GCCTTCTTCG GCGACACCCT GGACCTGACA CGCATGAGCG AATACCAGAT CGCCCAAGCC
GGCATTGGCC GCAAGTTCCA GAAGCCCACG GTGTTCGAAG CACTGACTGT GTTCGAGAAC
CTCGAGCTGG CACTGAAAAC CGAAAAATCG GTCTGGGCCT GCCTGGCAGC ACGCTTGAGC
GGTGAGCAAC AGCAACGCAT CGAGGAAGTG CTGACCACTT TGCGCCTGCT GCCCCTGGCC
CAGCGCCAGG CGGGCCTGCT GTCACATGGG CAGAAACAGT TCCTCGAGAT CGGCATGTTG
CTGGTGCAGG AGCCGCAACT GCTGCTGCTC GACGAGCCGG TGGCCGGCAT GACCGATGCC
GAGACCGAGT TCACCGCTGA GCTGTTCAGA GGCCTGGCCG GCAAGCATTC GCTGATGGTG
GTGGAGCACG ACATGGGATT TGTCGGCAGC ATCGCCGACC ATGTGACCGT GTTGCATCAG
GGCAGCGTGC TGGCAGAGGG GTCACTGGAG CAGGTACAGG CGGATGAGCG GGTGGTCGAG
GTTTATCTAG GGCGCTGA
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| Protein sequence | MKGVPPVHPE FMLEPVFDNL GSGRDAIGLG SRREAGLDTR HGTVLSLEGI SVSFDGFKAL
NALNLYIGVG ELRCIIGPNG AGKTTMMDVI TGKTRPDTGT AFFGDTLDLT RMSEYQIAQA
GIGRKFQKPT VFEALTVFEN LELALKTEKS VWACLAARLS GEQQQRIEEV LTTLRLLPLA
QRQAGLLSHG QKQFLEIGML LVQEPQLLLL DEPVAGMTDA ETEFTAELFR GLAGKHSLMV
VEHDMGFVGS IADHVTVLHQ GSVLAEGSLE QVQADERVVE VYLGR
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