| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4635 |
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| Symbol | |
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| ID | 6113616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5121494 |
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| End bp | 5122573 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624441 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_001751484 |
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| Protein GI | 170723796 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0860819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC CACTGCTTGT CACCGCTTCG CAAAAAGCCG GGCCGCGCCT GTCGCTAGCC
ATCGGCACCG TCGTCGTCCT GCTGTTGCTG GCCATGGCGC TGCTGTCGTT GCTGCCGCCC
GACCATGCCT TGCAGGTATC GGCCTACACC CTCACGCTGG TCGGCAAGAT CCTCTGCTAC
GCCATCGTCG CCCTGGCCCT GGACCTGGTC TGGGGCTACG CAGGGCTGCT GTCGCTCGGT
CACGGGCTGT TCTTTGCCCT CGGTGGCTAC GCCATGGGCA TGTACCTGAT GCGCCAGGCC
GCCGGTGACG GCCTGCCGGG GTTCATGACG TTCCTGTCGT GGAGCGAGCT GCCGTGGTAC
TGGGCCGGTA CCCAGCACTT TGCCTGGGCC CTGTGCCTGG TGGTGCTGGC GCCGGGCCTG
CTGGCACTGG TGTTTGGTTT CTTCGCCTTC CGCTCGCGGA TCAAGGGCGT GTATTTCTCG
ATCATGACCC AGGCCCTGAC CTTCGCCGGC ATGCTGCTGT TCTTCCGCAA CGAAACAGGG
TTTGGCGGCA ACAACGGTTT CACCAGCTTT CGCACGATTC TGGGCTTCGA CATTGCCGCA
CAGGGCACCC GCGCCGTGCT GTTCCTGCTG ACCGTAGGTT TGCTGCTGGC AAGCCTGTAC
CTGTGCTGGC GCCTGACCCA GAGCAAGTTC GGCCGCCTGC TCACCGCCGT ACGCGATGCA
GAAAACCGCA TGATGTTCTG CGGCTATGAC CCACGGGGTT TCAAGCTGCT GGTGTGGGTA
TTGAGCGCCG TGCTGTGCGG CCTGGCAGGT GCGCTGTATG TGCCACAGGT GGGCATCATC
AACCCCAGCG AGATGTCGCC GACCAACTCC ATCGAGGCTG CTGTCTGGGT AGCTTTGGGC
GGGCGCGGCA CACTGATCGG CCCGCTGCTG GGCGCTGGCC TGGTCAACGG CATGAAAAGC
TGGTTCACCG TGGCCTTCCC CGAGTTCTGG CTGTTCTTCC TCGGCGCATT GTTCATCCTC
GTCACCCTGT ACCTGCCCAA GGGCGTGGTC GGCCTGCTGA AGAAAAGGAG CCAGCCATGA
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| Protein sequence | MNQPLLVTAS QKAGPRLSLA IGTVVVLLLL AMALLSLLPP DHALQVSAYT LTLVGKILCY
AIVALALDLV WGYAGLLSLG HGLFFALGGY AMGMYLMRQA AGDGLPGFMT FLSWSELPWY
WAGTQHFAWA LCLVVLAPGL LALVFGFFAF RSRIKGVYFS IMTQALTFAG MLLFFRNETG
FGGNNGFTSF RTILGFDIAA QGTRAVLFLL TVGLLLASLY LCWRLTQSKF GRLLTAVRDA
ENRMMFCGYD PRGFKLLVWV LSAVLCGLAG ALYVPQVGII NPSEMSPTNS IEAAVWVALG
GRGTLIGPLL GAGLVNGMKS WFTVAFPEFW LFFLGALFIL VTLYLPKGVV GLLKKRSQP
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